Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Shank1D3YZU1 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Shank1D3YZU1 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.87□□□□□ -0.19
Shank1D3YZU1 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.87□□□□□ -0.19
Shank1D3YZU1 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shank1D3YZU1 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shank1D3YZU1 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Shank1D3YZU1 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Shank1D3YZU1 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shank1D3YZU1 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shank1D3YZU1 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shank1D3YZU1 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shank1D3YZU1 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shank1D3YZU1 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shank1D3YZU1 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shank1D3YZU1 Gm6018-201ENSMUST00000216090 1306 ntBASIC13.87□□□□□ -0.19
Shank1D3YZU1 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC13.87□□□□□ -0.19
Shank1D3YZU1 Gm15635-204ENSMUST00000208024 2539 ntBASIC13.86□□□□□ -0.19
Shank1D3YZU1 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shank1D3YZU1 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shank1D3YZU1 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Shank1D3YZU1 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shank1D3YZU1 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Shank1D3YZU1 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC13.86□□□□□ -0.19
Shank1D3YZU1 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shank1D3YZU1 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shank1D3YZU1 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shank1D3YZU1 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shank1D3YZU1 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Shank1D3YZU1 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shank1D3YZU1 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shank1D3YZU1 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Shank1D3YZU1 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shank1D3YZU1 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shank1D3YZU1 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Shank1D3YZU1 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shank1D3YZU1 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shank1D3YZU1 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shank1D3YZU1 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shank1D3YZU1 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
Shank1D3YZU1 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shank1D3YZU1 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Shank1D3YZU1 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shank1D3YZU1 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Shank1D3YZU1 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Shank1D3YZU1 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Shank1D3YZU1 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Shank1D3YZU1 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Shank1D3YZU1 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC13.86□□□□□ -0.19
Shank1D3YZU1 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shank1D3YZU1 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shank1D3YZU1 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Shank1D3YZU1 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Shank1D3YZU1 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Shank1D3YZU1 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Shank1D3YZU1 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Shank1D3YZU1 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shank1D3YZU1 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shank1D3YZU1 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shank1D3YZU1 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Shank1D3YZU1 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Shank1D3YZU1 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Shank1D3YZU1 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Shank1D3YZU1 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shank1D3YZU1 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shank1D3YZU1 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shank1D3YZU1 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shank1D3YZU1 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shank1D3YZU1 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shank1D3YZU1 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shank1D3YZU1 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC13.85□□□□□ -0.19
Shank1D3YZU1 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shank1D3YZU1 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.85□□□□□ -0.19
Shank1D3YZU1 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shank1D3YZU1 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shank1D3YZU1 Hivep3-201ENSMUST00000084306 2973 ntBASIC13.85□□□□□ -0.19
Shank1D3YZU1 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shank1D3YZU1 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC13.84□□□□□ -0.19
Shank1D3YZU1 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Shank1D3YZU1 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Shank1D3YZU1 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Shank1D3YZU1 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Shank1D3YZU1 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Shank1D3YZU1 H2-Pa-201ENSMUST00000182803 626 ntBASIC13.84□□□□□ -0.19
Shank1D3YZU1 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Shank1D3YZU1 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Shank1D3YZU1 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Shank1D3YZU1 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Shank1D3YZU1 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Shank1D3YZU1 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Shank1D3YZU1 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Shank1D3YZU1 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Shank1D3YZU1 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Shank1D3YZU1 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Shank1D3YZU1 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Shank1D3YZU1 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Shank1D3YZU1 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Shank1D3YZU1 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Shank1D3YZU1 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Shank1D3YZU1 Gm25287-201ENSMUST00000103846 110 ntBASIC13.83□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms