Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Gm13337-201ENSMUST00000119183 1594 ntBASIC12.47□□□□□ -0.41
Trav12d-1A0N8R0 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav12d-1A0N8R0 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trav12d-1A0N8R0 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav12d-1A0N8R0 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav12d-1A0N8R0 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC12.47□□□□□ -0.41
Trav12d-1A0N8R0 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav12d-1A0N8R0 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav12d-1A0N8R0 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC12.47□□□□□ -0.41
Trav12d-1A0N8R0 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav12d-1A0N8R0 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav12d-1A0N8R0 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav12d-1A0N8R0 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC12.47□□□□□ -0.41
Trav12d-1A0N8R0 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav12d-1A0N8R0 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Trav12d-1A0N8R0 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav12d-1A0N8R0 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav12d-1A0N8R0 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
Trav12d-1A0N8R0 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trav12d-1A0N8R0 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav12d-1A0N8R0 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC12.47□□□□□ -0.41
Trav12d-1A0N8R0 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav12d-1A0N8R0 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav12d-1A0N8R0 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav12d-1A0N8R0 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav12d-1A0N8R0 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav12d-1A0N8R0 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav12d-1A0N8R0 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC12.47□□□□□ -0.41
Trav12d-1A0N8R0 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav12d-1A0N8R0 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav12d-1A0N8R0 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav12d-1A0N8R0 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav12d-1A0N8R0 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav12d-1A0N8R0 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav12d-1A0N8R0 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav12d-1A0N8R0 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.46□□□□□ -0.41
Trav12d-1A0N8R0 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav12d-1A0N8R0 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav12d-1A0N8R0 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav12d-1A0N8R0 Gm8668-201ENSMUST00000120559 1447 ntBASIC12.46□□□□□ -0.41
Trav12d-1A0N8R0 Gm45760-201ENSMUST00000212190 1782 ntBASIC12.46□□□□□ -0.41
Trav12d-1A0N8R0 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav12d-1A0N8R0 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav12d-1A0N8R0 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav12d-1A0N8R0 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav12d-1A0N8R0 Mir770-201ENSMUST00000103252 94 ntBASIC12.46□□□□□ -0.41
Trav12d-1A0N8R0 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC12.46□□□□□ -0.41
Trav12d-1A0N8R0 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC12.46□□□□□ -0.41
Trav12d-1A0N8R0 Gm25406-201ENSMUST00000157599 105 ntBASIC12.46□□□□□ -0.41
Trav12d-1A0N8R0 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC12.46□□□□□ -0.41
Trav12d-1A0N8R0 Gm43799-201ENSMUST00000201845 579 ntBASIC12.46□□□□□ -0.41
Trav12d-1A0N8R0 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Trav12d-1A0N8R0 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav12d-1A0N8R0 AC130713.1-201ENSMUST00000228853 1096 ntBASIC12.46□□□□□ -0.41
Trav12d-1A0N8R0 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav12d-1A0N8R0 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav12d-1A0N8R0 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Trav12d-1A0N8R0 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav12d-1A0N8R0 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav12d-1A0N8R0 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC12.46□□□□□ -0.42
Trav12d-1A0N8R0 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav12d-1A0N8R0 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav12d-1A0N8R0 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav12d-1A0N8R0 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav12d-1A0N8R0 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav12d-1A0N8R0 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trav12d-1A0N8R0 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Trav12d-1A0N8R0 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Trav12d-1A0N8R0 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Trav12d-1A0N8R0 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trav12d-1A0N8R0 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav12d-1A0N8R0 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav12d-1A0N8R0 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav12d-1A0N8R0 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav12d-1A0N8R0 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav12d-1A0N8R0 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav12d-1A0N8R0 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav12d-1A0N8R0 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav12d-1A0N8R0 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav12d-1A0N8R0 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav12d-1A0N8R0 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav12d-1A0N8R0 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav12d-1A0N8R0 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav12d-1A0N8R0 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC12.45□□□□□ -0.42
Trav12d-1A0N8R0 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav12d-1A0N8R0 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC12.45□□□□□ -0.42
Trav12d-1A0N8R0 Gm1818-201ENSMUST00000169406 1184 ntBASIC12.45□□□□□ -0.42
Trav12d-1A0N8R0 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav12d-1A0N8R0 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav12d-1A0N8R0 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav12d-1A0N8R0 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Trav12d-1A0N8R0 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav12d-1A0N8R0 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav12d-1A0N8R0 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav12d-1A0N8R0 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav12d-1A0N8R0 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.45□□□□□ -0.42
Trav12d-1A0N8R0 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav12d-1A0N8R0 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC12.45□□□□□ -0.42
Trav12d-1A0N8R0 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav12d-1A0N8R0 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms