Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Gm7862-201ENSMUST00000121461 292 ntBASIC11.25□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC11.25□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13n-1A0A0G2JEU8 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Gm25406-201ENSMUST00000157599 105 ntBASIC11.25□□□□□ -0.61
Trav13n-1A0A0G2JEU8 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Gm4535-201ENSMUST00000182274 558 ntBASIC11.25□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Gm2651-201ENSMUST00000203560 838 ntBASIC11.25□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Gm9449-201ENSMUST00000207265 1011 ntBASIC11.25□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Gm10355-201ENSMUST00000097146 517 ntBASIC11.25□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC11.24□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Gm8097-201ENSMUST00000117903 829 ntBASIC11.24□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC11.24□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Mir5131-201ENSMUST00000175426 93 ntBASIC11.24□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Gm6443-201ENSMUST00000203599 874 ntBASIC11.24□□□□□ -0.61
Trav13n-1A0A0G2JEU8 AC138767.1-201ENSMUST00000222661 415 ntBASIC11.24□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Vti1a-206ENSMUST00000225529 1244 ntBASIC11.24□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC11.24□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13n-1A0A0G2JEU8 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC11.23□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC11.23□□□□□ -0.61
Trav13n-1A0A0G2JEU8 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Gm8349-201ENSMUST00000182720 1003 ntBASIC11.23□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Gm43514-201ENSMUST00000198852 424 ntBASIC11.23□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Gm10060-201ENSMUST00000212002 111 ntBASIC11.23□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC11.23□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms