Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv3A0A0A6YYE2 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
Trbv3A0A0A6YYE2 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC11.97□□□□□ -0.49
Trbv3A0A0A6YYE2 Mir6404-201ENSMUST00000183699 94 ntBASIC11.97□□□□□ -0.49
Trbv3A0A0A6YYE2 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC11.97□□□□□ -0.49
Trbv3A0A0A6YYE2 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv3A0A0A6YYE2 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC11.97□□□□□ -0.49
Trbv3A0A0A6YYE2 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv3A0A0A6YYE2 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv3A0A0A6YYE2 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trbv3A0A0A6YYE2 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv3A0A0A6YYE2 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv3A0A0A6YYE2 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv3A0A0A6YYE2 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv3A0A0A6YYE2 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv3A0A0A6YYE2 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC11.97□□□□□ -0.49
Trbv3A0A0A6YYE2 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv3A0A0A6YYE2 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv3A0A0A6YYE2 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trbv3A0A0A6YYE2 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
Trbv3A0A0A6YYE2 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC11.97□□□□□ -0.49
Trbv3A0A0A6YYE2 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC11.97□□□□□ -0.49
Trbv3A0A0A6YYE2 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC11.97□□□□□ -0.49
Trbv3A0A0A6YYE2 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv3A0A0A6YYE2 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trbv3A0A0A6YYE2 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trbv3A0A0A6YYE2 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.49
Trbv3A0A0A6YYE2 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trbv3A0A0A6YYE2 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trbv3A0A0A6YYE2 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Trbv3A0A0A6YYE2 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Trbv3A0A0A6YYE2 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trbv3A0A0A6YYE2 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trbv3A0A0A6YYE2 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Trbv3A0A0A6YYE2 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trbv3A0A0A6YYE2 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trbv3A0A0A6YYE2 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trbv3A0A0A6YYE2 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trbv3A0A0A6YYE2 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC11.96□□□□□ -0.49
Trbv3A0A0A6YYE2 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC11.96□□□□□ -0.49
Trbv3A0A0A6YYE2 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trbv3A0A0A6YYE2 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC11.96□□□□□ -0.49
Trbv3A0A0A6YYE2 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trbv3A0A0A6YYE2 Gm7367-201ENSMUST00000057611 492 ntBASIC11.96□□□□□ -0.49
Trbv3A0A0A6YYE2 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Trbv3A0A0A6YYE2 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trbv3A0A0A6YYE2 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trbv3A0A0A6YYE2 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trbv3A0A0A6YYE2 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trbv3A0A0A6YYE2 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Trbv3A0A0A6YYE2 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
Trbv3A0A0A6YYE2 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.5
Trbv3A0A0A6YYE2 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trbv3A0A0A6YYE2 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Trbv3A0A0A6YYE2 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trbv3A0A0A6YYE2 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trbv3A0A0A6YYE2 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trbv3A0A0A6YYE2 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Trbv3A0A0A6YYE2 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Trbv3A0A0A6YYE2 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv3A0A0A6YYE2 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC11.95□□□□□ -0.5
Trbv3A0A0A6YYE2 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
Trbv3A0A0A6YYE2 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv3A0A0A6YYE2 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv3A0A0A6YYE2 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC11.95□□□□□ -0.5
Trbv3A0A0A6YYE2 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv3A0A0A6YYE2 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv3A0A0A6YYE2 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv3A0A0A6YYE2 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv3A0A0A6YYE2 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv3A0A0A6YYE2 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv3A0A0A6YYE2 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv3A0A0A6YYE2 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv3A0A0A6YYE2 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv3A0A0A6YYE2 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv3A0A0A6YYE2 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv3A0A0A6YYE2 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Trbv3A0A0A6YYE2 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC11.95□□□□□ -0.5
Trbv3A0A0A6YYE2 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Trbv3A0A0A6YYE2 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv3A0A0A6YYE2 Odf3b-204ENSMUST00000227834 930 ntBASIC11.95□□□□□ -0.5
Trbv3A0A0A6YYE2 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv3A0A0A6YYE2 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC11.95□□□□□ -0.5
Trbv3A0A0A6YYE2 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv3A0A0A6YYE2 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv3A0A0A6YYE2 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv3A0A0A6YYE2 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Trbv3A0A0A6YYE2 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trbv3A0A0A6YYE2 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trbv3A0A0A6YYE2 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv3A0A0A6YYE2 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv3A0A0A6YYE2 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trbv3A0A0A6YYE2 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv3A0A0A6YYE2 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv3A0A0A6YYE2 Gm21451-201ENSMUST00000111062 2775 ntBASIC11.95□□□□□ -0.5
Trbv3A0A0A6YYE2 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv3A0A0A6YYE2 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Trbv3A0A0A6YYE2 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC11.94□□□□□ -0.5
Trbv3A0A0A6YYE2 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv3A0A0A6YYE2 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms