Protein–RNA interactions for Protein: A0A0A6YXG2

Ighv1-56, Immunoglobulin heavy variable 1-56 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-56A0A0A6YXG2 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC10.44□□□□□ -0.74
Ighv1-56A0A0A6YXG2 AC125350.1-201ENSMUST00000225115 903 ntBASIC10.44□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC10.44□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Ighv1-56A0A0A6YXG2 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC10.44□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC10.43□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC10.43□□□□□ -0.74
Ighv1-56A0A0A6YXG2 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC10.43□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Gm10013-201ENSMUST00000106074 672 ntBASIC10.43□□□□□ -0.74
Ighv1-56A0A0A6YXG2 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Ighv1-56A0A0A6YXG2 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC10.43□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ighv1-56A0A0A6YXG2 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ighv1-56A0A0A6YXG2 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Gm13034-201ENSMUST00000121342 3177 ntBASIC10.43□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ighv1-56A0A0A6YXG2 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC10.43□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC10.43□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Ighv1-56A0A0A6YXG2 BC037039-201ENSMUST00000192003 2205 ntBASIC10.42□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC10.42□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC10.42□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Gm6623-201ENSMUST00000173570 544 ntBASIC10.42□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC10.42□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Ighv1-56A0A0A6YXG2 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Gm45605-201ENSMUST00000210265 4269 ntBASIC10.42□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ighv1-56A0A0A6YXG2 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC10.41□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms