Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6d-5A0A075B6B9 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6d-5A0A075B6B9 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6d-5A0A075B6B9 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trav6d-5A0A075B6B9 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6d-5A0A075B6B9 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6d-5A0A075B6B9 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6d-5A0A075B6B9 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trav6d-5A0A075B6B9 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6d-5A0A075B6B9 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6d-5A0A075B6B9 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav6d-5A0A075B6B9 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6d-5A0A075B6B9 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6d-5A0A075B6B9 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6d-5A0A075B6B9 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6d-5A0A075B6B9 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6d-5A0A075B6B9 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav6d-5A0A075B6B9 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Trav6d-5A0A075B6B9 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav6d-5A0A075B6B9 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Trav6d-5A0A075B6B9 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav6d-5A0A075B6B9 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav6d-5A0A075B6B9 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trav6d-5A0A075B6B9 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC12.52□□□□□ -0.4
Trav6d-5A0A075B6B9 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav6d-5A0A075B6B9 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav6d-5A0A075B6B9 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Trav6d-5A0A075B6B9 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav6d-5A0A075B6B9 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6d-5A0A075B6B9 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6d-5A0A075B6B9 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Trav6d-5A0A075B6B9 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Trav6d-5A0A075B6B9 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC12.52□□□□□ -0.41
Trav6d-5A0A075B6B9 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6d-5A0A075B6B9 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC12.52□□□□□ -0.41
Trav6d-5A0A075B6B9 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC12.52□□□□□ -0.41
Trav6d-5A0A075B6B9 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6d-5A0A075B6B9 AC114585.2-202ENSMUST00000228094 426 ntBASIC12.52□□□□□ -0.41
Trav6d-5A0A075B6B9 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6d-5A0A075B6B9 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6d-5A0A075B6B9 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6d-5A0A075B6B9 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6d-5A0A075B6B9 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6d-5A0A075B6B9 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6d-5A0A075B6B9 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Trav6d-5A0A075B6B9 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6d-5A0A075B6B9 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6d-5A0A075B6B9 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6d-5A0A075B6B9 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6d-5A0A075B6B9 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6d-5A0A075B6B9 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6d-5A0A075B6B9 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6d-5A0A075B6B9 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6d-5A0A075B6B9 Gm13337-201ENSMUST00000119183 1594 ntBASIC12.52□□□□□ -0.41
Trav6d-5A0A075B6B9 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6d-5A0A075B6B9 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6d-5A0A075B6B9 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6d-5A0A075B6B9 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6d-5A0A075B6B9 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6d-5A0A075B6B9 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6d-5A0A075B6B9 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6d-5A0A075B6B9 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trav6d-5A0A075B6B9 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6d-5A0A075B6B9 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6d-5A0A075B6B9 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12.51□□□□□ -0.41
Trav6d-5A0A075B6B9 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Trav6d-5A0A075B6B9 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6d-5A0A075B6B9 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6d-5A0A075B6B9 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC12.51□□□□□ -0.41
Trav6d-5A0A075B6B9 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6d-5A0A075B6B9 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6d-5A0A075B6B9 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6d-5A0A075B6B9 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Trav6d-5A0A075B6B9 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6d-5A0A075B6B9 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6d-5A0A075B6B9 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6d-5A0A075B6B9 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC12.51□□□□□ -0.41
Trav6d-5A0A075B6B9 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6d-5A0A075B6B9 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6d-5A0A075B6B9 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6d-5A0A075B6B9 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6d-5A0A075B6B9 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6d-5A0A075B6B9 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6d-5A0A075B6B9 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Trav6d-5A0A075B6B9 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6d-5A0A075B6B9 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6d-5A0A075B6B9 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6d-5A0A075B6B9 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6d-5A0A075B6B9 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6d-5A0A075B6B9 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6d-5A0A075B6B9 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6d-5A0A075B6B9 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6d-5A0A075B6B9 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6d-5A0A075B6B9 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6d-5A0A075B6B9 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6d-5A0A075B6B9 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6d-5A0A075B6B9 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6d-5A0A075B6B9 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6d-5A0A075B6B9 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6d-5A0A075B6B9 Gm20760-201ENSMUST00000179197 648 ntBASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms