Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC12.69□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC12.69□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC12.69□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Zkscan4-202ENSMUST00000225845 1506 ntBASIC12.68□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Gm27389-201ENSMUST00000183622 195 ntBASIC12.68□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC12.68□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Gm45058-201ENSMUST00000205810 766 ntBASIC12.68□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Gm7367-201ENSMUST00000057611 492 ntBASIC12.68□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.68□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC12.68□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC12.68□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Gm38058-201ENSMUST00000194323 4368 ntBASIC12.67□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.67□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC12.67□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC12.67□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC12.67□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 AC114585.2-202ENSMUST00000228094 426 ntBASIC12.67□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Efs-202ENSMUST00000227037 2540 ntBASIC12.67□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms