Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Ighv6-1-201ENSMUST00000193612 343 ntBASIC13.99□□□□□ -0.17
H2afb3S4R1G7 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
H2afb3S4R1G7 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
H2afb3S4R1G7 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
H2afb3S4R1G7 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
H2afb3S4R1G7 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
H2afb3S4R1G7 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
H2afb3S4R1G7 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
H2afb3S4R1G7 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
H2afb3S4R1G7 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
H2afb3S4R1G7 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
H2afb3S4R1G7 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
H2afb3S4R1G7 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
H2afb3S4R1G7 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
H2afb3S4R1G7 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
H2afb3S4R1G7 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
H2afb3S4R1G7 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
H2afb3S4R1G7 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
H2afb3S4R1G7 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
H2afb3S4R1G7 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
H2afb3S4R1G7 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
H2afb3S4R1G7 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
H2afb3S4R1G7 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
H2afb3S4R1G7 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
H2afb3S4R1G7 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
H2afb3S4R1G7 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.98□□□□□ -0.17
H2afb3S4R1G7 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
H2afb3S4R1G7 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
H2afb3S4R1G7 Gm7507-201ENSMUST00000183053 1008 ntBASIC13.98□□□□□ -0.17
H2afb3S4R1G7 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
H2afb3S4R1G7 AC121577.1-201ENSMUST00000227302 707 ntBASIC13.98□□□□□ -0.17
H2afb3S4R1G7 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
H2afb3S4R1G7 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
H2afb3S4R1G7 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
H2afb3S4R1G7 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
H2afb3S4R1G7 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
H2afb3S4R1G7 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
H2afb3S4R1G7 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
H2afb3S4R1G7 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
H2afb3S4R1G7 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
H2afb3S4R1G7 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
H2afb3S4R1G7 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
H2afb3S4R1G7 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
H2afb3S4R1G7 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
H2afb3S4R1G7 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
H2afb3S4R1G7 Gm8258-201ENSMUST00000055593 1449 ntBASIC13.98□□□□□ -0.17
H2afb3S4R1G7 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
H2afb3S4R1G7 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
H2afb3S4R1G7 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
H2afb3S4R1G7 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
H2afb3S4R1G7 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
H2afb3S4R1G7 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
H2afb3S4R1G7 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
H2afb3S4R1G7 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
H2afb3S4R1G7 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
H2afb3S4R1G7 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
H2afb3S4R1G7 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
H2afb3S4R1G7 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
H2afb3S4R1G7 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
H2afb3S4R1G7 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
H2afb3S4R1G7 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
H2afb3S4R1G7 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
H2afb3S4R1G7 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
H2afb3S4R1G7 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC13.97□□□□□ -0.17
H2afb3S4R1G7 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
H2afb3S4R1G7 Gm6345-202ENSMUST00000180900 204 ntBASIC13.97□□□□□ -0.17
H2afb3S4R1G7 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC13.97□□□□□ -0.17
H2afb3S4R1G7 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC13.97□□□□□ -0.17
H2afb3S4R1G7 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
H2afb3S4R1G7 AC130713.1-201ENSMUST00000228853 1096 ntBASIC13.97□□□□□ -0.17
H2afb3S4R1G7 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
H2afb3S4R1G7 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
H2afb3S4R1G7 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
H2afb3S4R1G7 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
H2afb3S4R1G7 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
H2afb3S4R1G7 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
H2afb3S4R1G7 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC13.97□□□□□ -0.17
H2afb3S4R1G7 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
H2afb3S4R1G7 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
H2afb3S4R1G7 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
H2afb3S4R1G7 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
H2afb3S4R1G7 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
H2afb3S4R1G7 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
H2afb3S4R1G7 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
H2afb3S4R1G7 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
H2afb3S4R1G7 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
H2afb3S4R1G7 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
H2afb3S4R1G7 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
H2afb3S4R1G7 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
H2afb3S4R1G7 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
H2afb3S4R1G7 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
H2afb3S4R1G7 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
H2afb3S4R1G7 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
H2afb3S4R1G7 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
H2afb3S4R1G7 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
H2afb3S4R1G7 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
H2afb3S4R1G7 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
H2afb3S4R1G7 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
H2afb3S4R1G7 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
H2afb3S4R1G7 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms