Protein–RNA interactions for Protein: Q9Z2V5

Hdac6, Histone deacetylase 6, mousemouse

Predictions only

Length 1,149 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac6Q9Z2V5 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC19.37■□□□□ 0.69
Hdac6Q9Z2V5 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hdac6Q9Z2V5 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Hdac6Q9Z2V5 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hdac6Q9Z2V5 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC19.37■□□□□ 0.69
Hdac6Q9Z2V5 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hdac6Q9Z2V5 Gm11543-201ENSMUST00000120758 370 ntBASIC19.37■□□□□ 0.69
Hdac6Q9Z2V5 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC19.37■□□□□ 0.69
Hdac6Q9Z2V5 AC140375.2-201ENSMUST00000225283 584 ntBASIC19.37■□□□□ 0.69
Hdac6Q9Z2V5 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hdac6Q9Z2V5 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Hdac6Q9Z2V5 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hdac6Q9Z2V5 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
Hdac6Q9Z2V5 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hdac6Q9Z2V5 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Hdac6Q9Z2V5 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hdac6Q9Z2V5 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hdac6Q9Z2V5 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Hdac6Q9Z2V5 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Hdac6Q9Z2V5 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Hdac6Q9Z2V5 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Hdac6Q9Z2V5 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Hdac6Q9Z2V5 Gm5866-201ENSMUST00000177881 973 ntBASIC19.36■□□□□ 0.69
Hdac6Q9Z2V5 Wdyhv1-203ENSMUST00000226889 394 ntBASIC19.36■□□□□ 0.69
Hdac6Q9Z2V5 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC19.36■□□□□ 0.69
Hdac6Q9Z2V5 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hdac6Q9Z2V5 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Hdac6Q9Z2V5 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC19.36■□□□□ 0.69
Hdac6Q9Z2V5 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hdac6Q9Z2V5 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Hdac6Q9Z2V5 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hdac6Q9Z2V5 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hdac6Q9Z2V5 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Hdac6Q9Z2V5 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC19.36■□□□□ 0.69
Hdac6Q9Z2V5 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Hdac6Q9Z2V5 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hdac6Q9Z2V5 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hdac6Q9Z2V5 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hdac6Q9Z2V5 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Hdac6Q9Z2V5 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hdac6Q9Z2V5 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC19.35■□□□□ 0.69
Hdac6Q9Z2V5 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC19.35■□□□□ 0.69
Hdac6Q9Z2V5 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Hdac6Q9Z2V5 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC19.35■□□□□ 0.69
Hdac6Q9Z2V5 Gm17837-201ENSMUST00000186435 985 ntBASIC19.35■□□□□ 0.69
Hdac6Q9Z2V5 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC19.35■□□□□ 0.69
Hdac6Q9Z2V5 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Hdac6Q9Z2V5 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Hdac6Q9Z2V5 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Hdac6Q9Z2V5 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Hdac6Q9Z2V5 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Hdac6Q9Z2V5 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hdac6Q9Z2V5 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hdac6Q9Z2V5 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Hdac6Q9Z2V5 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC19.34■□□□□ 0.69
Hdac6Q9Z2V5 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC19.34■□□□□ 0.69
Hdac6Q9Z2V5 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hdac6Q9Z2V5 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hdac6Q9Z2V5 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC19.34■□□□□ 0.69
Hdac6Q9Z2V5 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Hdac6Q9Z2V5 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Hdac6Q9Z2V5 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hdac6Q9Z2V5 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Hdac6Q9Z2V5 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC19.34■□□□□ 0.69
Hdac6Q9Z2V5 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC19.34■□□□□ 0.69
Hdac6Q9Z2V5 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hdac6Q9Z2V5 Gm9824-201ENSMUST00000178707 561 ntBASIC19.34■□□□□ 0.69
Hdac6Q9Z2V5 Gm38225-201ENSMUST00000194001 393 ntBASIC19.34■□□□□ 0.69
Hdac6Q9Z2V5 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Hdac6Q9Z2V5 Rbfox2-208ENSMUST00000227930 1218 ntBASIC19.34■□□□□ 0.69
Hdac6Q9Z2V5 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hdac6Q9Z2V5 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Hdac6Q9Z2V5 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hdac6Q9Z2V5 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
Hdac6Q9Z2V5 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Hdac6Q9Z2V5 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Hdac6Q9Z2V5 Gm13517-201ENSMUST00000120782 1495 ntBASIC19.34■□□□□ 0.69
Hdac6Q9Z2V5 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Hdac6Q9Z2V5 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
Hdac6Q9Z2V5 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Hdac6Q9Z2V5 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Hdac6Q9Z2V5 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC19.33■□□□□ 0.69
Hdac6Q9Z2V5 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Hdac6Q9Z2V5 Gm45293-201ENSMUST00000209754 1812 ntBASIC19.33■□□□□ 0.69
Hdac6Q9Z2V5 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC19.33■□□□□ 0.68
Hdac6Q9Z2V5 Gm27989-201ENSMUST00000184721 107 ntBASIC19.33■□□□□ 0.68
Hdac6Q9Z2V5 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Hdac6Q9Z2V5 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC19.33■□□□□ 0.68
Hdac6Q9Z2V5 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC19.33■□□□□ 0.68
Hdac6Q9Z2V5 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hdac6Q9Z2V5 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hdac6Q9Z2V5 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC19.33■□□□□ 0.68
Hdac6Q9Z2V5 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Hdac6Q9Z2V5 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
Hdac6Q9Z2V5 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hdac6Q9Z2V5 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hdac6Q9Z2V5 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hdac6Q9Z2V5 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hdac6Q9Z2V5 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hdac6Q9Z2V5 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms