Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC15.92■□□□□ 0.14
Scn5aQ9JJV9 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Scn5aQ9JJV9 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Scn5aQ9JJV9 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC15.92■□□□□ 0.14
Scn5aQ9JJV9 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Scn5aQ9JJV9 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Scn5aQ9JJV9 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Scn5aQ9JJV9 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Scn5aQ9JJV9 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Scn5aQ9JJV9 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Scn5aQ9JJV9 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Scn5aQ9JJV9 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Scn5aQ9JJV9 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Scn5aQ9JJV9 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
Scn5aQ9JJV9 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
Scn5aQ9JJV9 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Scn5aQ9JJV9 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Scn5aQ9JJV9 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC15.92■□□□□ 0.14
Scn5aQ9JJV9 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Scn5aQ9JJV9 Gm24158-201ENSMUST00000175263 71 ntBASIC15.92■□□□□ 0.14
Scn5aQ9JJV9 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC15.92■□□□□ 0.14
Scn5aQ9JJV9 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Scn5aQ9JJV9 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Scn5aQ9JJV9 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Scn5aQ9JJV9 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Scn5aQ9JJV9 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC15.91■□□□□ 0.14
Scn5aQ9JJV9 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Scn5aQ9JJV9 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Scn5aQ9JJV9 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
Scn5aQ9JJV9 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Scn5aQ9JJV9 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Scn5aQ9JJV9 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC15.91■□□□□ 0.14
Scn5aQ9JJV9 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC15.91■□□□□ 0.14
Scn5aQ9JJV9 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Scn5aQ9JJV9 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Scn5aQ9JJV9 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
Scn5aQ9JJV9 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Scn5aQ9JJV9 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Scn5aQ9JJV9 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Scn5aQ9JJV9 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Scn5aQ9JJV9 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Scn5aQ9JJV9 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Scn5aQ9JJV9 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scn5aQ9JJV9 Gm12151-201ENSMUST00000121374 290 ntBASIC15.9■□□□□ 0.14
Scn5aQ9JJV9 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Scn5aQ9JJV9 Gm27430-201ENSMUST00000184585 107 ntBASIC15.9■□□□□ 0.14
Scn5aQ9JJV9 Gm44333-201ENSMUST00000197168 107 ntBASIC15.9■□□□□ 0.14
Scn5aQ9JJV9 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scn5aQ9JJV9 AC159621.2-201ENSMUST00000223519 1326 ntBASIC15.9■□□□□ 0.14
Scn5aQ9JJV9 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Scn5aQ9JJV9 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scn5aQ9JJV9 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC15.9■□□□□ 0.14
Scn5aQ9JJV9 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scn5aQ9JJV9 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scn5aQ9JJV9 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Scn5aQ9JJV9 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC15.9■□□□□ 0.14
Scn5aQ9JJV9 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC15.9■□□□□ 0.14
Scn5aQ9JJV9 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scn5aQ9JJV9 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scn5aQ9JJV9 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scn5aQ9JJV9 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scn5aQ9JJV9 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scn5aQ9JJV9 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scn5aQ9JJV9 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scn5aQ9JJV9 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Scn5aQ9JJV9 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
Scn5aQ9JJV9 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scn5aQ9JJV9 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scn5aQ9JJV9 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scn5aQ9JJV9 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scn5aQ9JJV9 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC15.89■□□□□ 0.13
Scn5aQ9JJV9 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Scn5aQ9JJV9 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC15.89■□□□□ 0.13
Scn5aQ9JJV9 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Scn5aQ9JJV9 Gm6415-201ENSMUST00000118488 348 ntBASIC15.89■□□□□ 0.13
Scn5aQ9JJV9 Gm11543-201ENSMUST00000120758 370 ntBASIC15.89■□□□□ 0.13
Scn5aQ9JJV9 Gm7730-201ENSMUST00000212486 454 ntBASIC15.89■□□□□ 0.13
Scn5aQ9JJV9 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scn5aQ9JJV9 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scn5aQ9JJV9 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scn5aQ9JJV9 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC15.89■□□□□ 0.13
Scn5aQ9JJV9 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC15.89■□□□□ 0.13
Scn5aQ9JJV9 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scn5aQ9JJV9 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Scn5aQ9JJV9 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Scn5aQ9JJV9 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
Scn5aQ9JJV9 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scn5aQ9JJV9 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scn5aQ9JJV9 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scn5aQ9JJV9 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scn5aQ9JJV9 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC15.89■□□□□ 0.13
Scn5aQ9JJV9 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scn5aQ9JJV9 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scn5aQ9JJV9 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC15.89■□□□□ 0.13
Scn5aQ9JJV9 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC15.89■□□□□ 0.13
Scn5aQ9JJV9 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC15.89■□□□□ 0.13
Scn5aQ9JJV9 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scn5aQ9JJV9 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scn5aQ9JJV9 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scn5aQ9JJV9 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms