Protein–RNA interactions for Protein: Q9ES97

Rtn3, Reticulon-3, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3Q9ES97 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rtn3Q9ES97 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rtn3Q9ES97 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rtn3Q9ES97 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Rtn3Q9ES97 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rtn3Q9ES97 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rtn3Q9ES97 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rtn3Q9ES97 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rtn3Q9ES97 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rtn3Q9ES97 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rtn3Q9ES97 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rtn3Q9ES97 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rtn3Q9ES97 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Rtn3Q9ES97 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
Rtn3Q9ES97 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC16.53■□□□□ 0.24
Rtn3Q9ES97 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC16.53■□□□□ 0.24
Rtn3Q9ES97 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rtn3Q9ES97 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.53■□□□□ 0.24
Rtn3Q9ES97 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC16.53■□□□□ 0.24
Rtn3Q9ES97 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Rtn3Q9ES97 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rtn3Q9ES97 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rtn3Q9ES97 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.53■□□□□ 0.24
Rtn3Q9ES97 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.53■□□□□ 0.24
Rtn3Q9ES97 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rtn3Q9ES97 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rtn3Q9ES97 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
Rtn3Q9ES97 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.53■□□□□ 0.24
Rtn3Q9ES97 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rtn3Q9ES97 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rtn3Q9ES97 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rtn3Q9ES97 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Rtn3Q9ES97 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rtn3Q9ES97 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC16.53■□□□□ 0.24
Rtn3Q9ES97 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rtn3Q9ES97 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Rtn3Q9ES97 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rtn3Q9ES97 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Rtn3Q9ES97 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rtn3Q9ES97 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rtn3Q9ES97 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rtn3Q9ES97 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rtn3Q9ES97 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Rtn3Q9ES97 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rtn3Q9ES97 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rtn3Q9ES97 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rtn3Q9ES97 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rtn3Q9ES97 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Rtn3Q9ES97 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rtn3Q9ES97 Gm18195-201ENSMUST00000207604 706 ntBASIC16.52■□□□□ 0.24
Rtn3Q9ES97 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.52■□□□□ 0.24
Rtn3Q9ES97 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rtn3Q9ES97 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
Rtn3Q9ES97 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rtn3Q9ES97 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rtn3Q9ES97 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rtn3Q9ES97 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rtn3Q9ES97 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rtn3Q9ES97 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Rtn3Q9ES97 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rtn3Q9ES97 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rtn3Q9ES97 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rtn3Q9ES97 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rtn3Q9ES97 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rtn3Q9ES97 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rtn3Q9ES97 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rtn3Q9ES97 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rtn3Q9ES97 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rtn3Q9ES97 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.51■□□□□ 0.23
Rtn3Q9ES97 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rtn3Q9ES97 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.51■□□□□ 0.23
Rtn3Q9ES97 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Rtn3Q9ES97 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rtn3Q9ES97 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rtn3Q9ES97 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rtn3Q9ES97 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.51■□□□□ 0.23
Rtn3Q9ES97 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC16.51■□□□□ 0.23
Rtn3Q9ES97 Gm13884-201ENSMUST00000118103 829 ntBASIC16.51■□□□□ 0.23
Rtn3Q9ES97 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rtn3Q9ES97 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rtn3Q9ES97 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rtn3Q9ES97 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC16.51■□□□□ 0.23
Rtn3Q9ES97 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rtn3Q9ES97 Rps4l-201ENSMUST00000071745 943 ntBASIC16.51■□□□□ 0.23
Rtn3Q9ES97 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rtn3Q9ES97 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rtn3Q9ES97 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.51■□□□□ 0.23
Rtn3Q9ES97 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Rtn3Q9ES97 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rtn3Q9ES97 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Rtn3Q9ES97 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rtn3Q9ES97 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rtn3Q9ES97 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rtn3Q9ES97 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC16.51■□□□□ 0.23
Rtn3Q9ES97 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rtn3Q9ES97 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rtn3Q9ES97 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rtn3Q9ES97 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rtn3Q9ES97 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Rtn3Q9ES97 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms