Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cfap53Q9D439 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cfap53Q9D439 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cfap53Q9D439 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cfap53Q9D439 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Cfap53Q9D439 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cfap53Q9D439 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cfap53Q9D439 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Cfap53Q9D439 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cfap53Q9D439 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cfap53Q9D439 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cfap53Q9D439 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cfap53Q9D439 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cfap53Q9D439 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cfap53Q9D439 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cfap53Q9D439 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cfap53Q9D439 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cfap53Q9D439 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC17.05■□□□□ 0.32
Cfap53Q9D439 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cfap53Q9D439 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC17.05■□□□□ 0.32
Cfap53Q9D439 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC17.05■□□□□ 0.32
Cfap53Q9D439 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC17.05■□□□□ 0.32
Cfap53Q9D439 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC17.05■□□□□ 0.32
Cfap53Q9D439 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC17.05■□□□□ 0.32
Cfap53Q9D439 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cfap53Q9D439 Gm7506-201ENSMUST00000207758 815 ntBASIC17.05■□□□□ 0.32
Cfap53Q9D439 AC117588.1-201ENSMUST00000228510 999 ntBASIC17.05■□□□□ 0.32
Cfap53Q9D439 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cfap53Q9D439 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cfap53Q9D439 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cfap53Q9D439 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cfap53Q9D439 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cfap53Q9D439 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cfap53Q9D439 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC17.05■□□□□ 0.32
Cfap53Q9D439 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC17.05■□□□□ 0.32
Cfap53Q9D439 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cfap53Q9D439 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.05■□□□□ 0.32
Cfap53Q9D439 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cfap53Q9D439 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC17.05■□□□□ 0.32
Cfap53Q9D439 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cfap53Q9D439 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cfap53Q9D439 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cfap53Q9D439 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Cfap53Q9D439 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Cfap53Q9D439 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cfap53Q9D439 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cfap53Q9D439 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Cfap53Q9D439 Gm9103-201ENSMUST00000119371 405 ntBASIC17.04■□□□□ 0.32
Cfap53Q9D439 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cfap53Q9D439 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cfap53Q9D439 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Cfap53Q9D439 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.04■□□□□ 0.32
Cfap53Q9D439 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cfap53Q9D439 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cfap53Q9D439 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cfap53Q9D439 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Cfap53Q9D439 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Cfap53Q9D439 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cfap53Q9D439 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Cfap53Q9D439 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cfap53Q9D439 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Cfap53Q9D439 Ccdc166-201ENSMUST00000182172 2584 ntBASIC17.03■□□□□ 0.32
Cfap53Q9D439 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cfap53Q9D439 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cfap53Q9D439 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.03■□□□□ 0.32
Cfap53Q9D439 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cfap53Q9D439 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cfap53Q9D439 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cfap53Q9D439 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
Cfap53Q9D439 Gm28033-201ENSMUST00000184224 96 ntBASIC17.03■□□□□ 0.32
Cfap53Q9D439 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
Cfap53Q9D439 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cfap53Q9D439 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC17.03■□□□□ 0.32
Cfap53Q9D439 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC17.03■□□□□ 0.32
Cfap53Q9D439 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cfap53Q9D439 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cfap53Q9D439 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cfap53Q9D439 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Cfap53Q9D439 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cfap53Q9D439 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cfap53Q9D439 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Cfap53Q9D439 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cfap53Q9D439 AC163637.1-201ENSMUST00000215491 1894 ntBASIC17.03■□□□□ 0.32
Cfap53Q9D439 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cfap53Q9D439 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
Cfap53Q9D439 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Cfap53Q9D439 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC17.03■□□□□ 0.32
Cfap53Q9D439 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cfap53Q9D439 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cfap53Q9D439 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cfap53Q9D439 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cfap53Q9D439 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cfap53Q9D439 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC17.02■□□□□ 0.32
Cfap53Q9D439 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cfap53Q9D439 Gm16011-201ENSMUST00000121567 2662 ntBASIC17.02■□□□□ 0.32
Cfap53Q9D439 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Cfap53Q9D439 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cfap53Q9D439 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
Cfap53Q9D439 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cfap53Q9D439 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms