Protein–RNA interactions for Protein: Q9D361

Snrnp48, U11/U12 small nuclear ribonucleoprotein 48 kDa protein, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp48Q9D361 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Snrnp48Q9D361 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Snrnp48Q9D361 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Snrnp48Q9D361 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Snrnp48Q9D361 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Snrnp48Q9D361 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Snrnp48Q9D361 Gm24589-201ENSMUST00000116692 94 ntBASIC15.5■□□□□ 0.07
Snrnp48Q9D361 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Snrnp48Q9D361 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Snrnp48Q9D361 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Snrnp48Q9D361 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Snrnp48Q9D361 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Snrnp48Q9D361 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Snrnp48Q9D361 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Snrnp48Q9D361 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Snrnp48Q9D361 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Snrnp48Q9D361 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Snrnp48Q9D361 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Snrnp48Q9D361 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Snrnp48Q9D361 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Snrnp48Q9D361 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Snrnp48Q9D361 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Snrnp48Q9D361 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Snrnp48Q9D361 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Snrnp48Q9D361 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Snrnp48Q9D361 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Snrnp48Q9D361 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Snrnp48Q9D361 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Snrnp48Q9D361 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Snrnp48Q9D361 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Snrnp48Q9D361 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Snrnp48Q9D361 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
Snrnp48Q9D361 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC15.49■□□□□ 0.07
Snrnp48Q9D361 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Snrnp48Q9D361 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC15.49■□□□□ 0.07
Snrnp48Q9D361 Gm11780-201ENSMUST00000136880 516 ntBASIC15.49■□□□□ 0.07
Snrnp48Q9D361 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15.49■□□□□ 0.07
Snrnp48Q9D361 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Snrnp48Q9D361 AC093926.2-201ENSMUST00000214468 1228 ntBASIC15.49■□□□□ 0.07
Snrnp48Q9D361 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC15.49■□□□□ 0.07
Snrnp48Q9D361 AC154757.1-201ENSMUST00000228289 336 ntBASIC15.49■□□□□ 0.07
Snrnp48Q9D361 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Snrnp48Q9D361 Rps4l-201ENSMUST00000071745 943 ntBASIC15.49■□□□□ 0.07
Snrnp48Q9D361 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC15.49■□□□□ 0.07
Snrnp48Q9D361 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Snrnp48Q9D361 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Snrnp48Q9D361 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Snrnp48Q9D361 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Snrnp48Q9D361 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC15.49■□□□□ 0.07
Snrnp48Q9D361 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Snrnp48Q9D361 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Snrnp48Q9D361 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Snrnp48Q9D361 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Snrnp48Q9D361 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Snrnp48Q9D361 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Snrnp48Q9D361 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Snrnp48Q9D361 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.48■□□□□ 0.07
Snrnp48Q9D361 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Snrnp48Q9D361 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Snrnp48Q9D361 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Snrnp48Q9D361 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Snrnp48Q9D361 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Snrnp48Q9D361 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Snrnp48Q9D361 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Snrnp48Q9D361 App-207ENSMUST00000227737 2827 ntBASIC15.48■□□□□ 0.07
Snrnp48Q9D361 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Snrnp48Q9D361 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15.48■□□□□ 0.07
Snrnp48Q9D361 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
Snrnp48Q9D361 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Snrnp48Q9D361 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Snrnp48Q9D361 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Snrnp48Q9D361 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Snrnp48Q9D361 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Snrnp48Q9D361 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC15.48■□□□□ 0.07
Snrnp48Q9D361 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Snrnp48Q9D361 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Snrnp48Q9D361 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Snrnp48Q9D361 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC15.48■□□□□ 0.07
Snrnp48Q9D361 Asic1-205ENSMUST00000228185 1818 ntBASIC15.47■□□□□ 0.07
Snrnp48Q9D361 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Snrnp48Q9D361 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Snrnp48Q9D361 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Snrnp48Q9D361 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Snrnp48Q9D361 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.47■□□□□ 0.07
Snrnp48Q9D361 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Snrnp48Q9D361 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Snrnp48Q9D361 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Snrnp48Q9D361 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Snrnp48Q9D361 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Snrnp48Q9D361 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Snrnp48Q9D361 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Snrnp48Q9D361 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC15.47■□□□□ 0.07
Snrnp48Q9D361 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Snrnp48Q9D361 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC15.47■□□□□ 0.07
Snrnp48Q9D361 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Snrnp48Q9D361 Gm44357-201ENSMUST00000195897 142 ntBASIC15.47■□□□□ 0.07
Snrnp48Q9D361 Gm19658-201ENSMUST00000196231 138 ntBASIC15.47■□□□□ 0.07
Snrnp48Q9D361 Gm44367-201ENSMUST00000196836 138 ntBASIC15.47■□□□□ 0.07
Snrnp48Q9D361 Gm44350-201ENSMUST00000197197 138 ntBASIC15.47■□□□□ 0.07
Snrnp48Q9D361 Gm44390-201ENSMUST00000197533 144 ntBASIC15.47■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms