Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chaf1bQ9D0N7 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chaf1bQ9D0N7 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chaf1bQ9D0N7 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chaf1bQ9D0N7 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Chaf1bQ9D0N7 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chaf1bQ9D0N7 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chaf1bQ9D0N7 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.64□□□□□ -0.07
Chaf1bQ9D0N7 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chaf1bQ9D0N7 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Chaf1bQ9D0N7 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Chaf1bQ9D0N7 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Chaf1bQ9D0N7 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Chaf1bQ9D0N7 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Chaf1bQ9D0N7 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Chaf1bQ9D0N7 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Chaf1bQ9D0N7 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
Chaf1bQ9D0N7 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Chaf1bQ9D0N7 Gm26039-201ENSMUST00000158152 144 ntBASIC14.63□□□□□ -0.07
Chaf1bQ9D0N7 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Chaf1bQ9D0N7 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Chaf1bQ9D0N7 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC14.63□□□□□ -0.07
Chaf1bQ9D0N7 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC14.63□□□□□ -0.07
Chaf1bQ9D0N7 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Chaf1bQ9D0N7 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC14.63□□□□□ -0.07
Chaf1bQ9D0N7 Gm30025-201ENSMUST00000218555 728 ntBASIC14.63□□□□□ -0.07
Chaf1bQ9D0N7 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Chaf1bQ9D0N7 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Chaf1bQ9D0N7 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC14.63□□□□□ -0.07
Chaf1bQ9D0N7 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Chaf1bQ9D0N7 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC14.63□□□□□ -0.07
Chaf1bQ9D0N7 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Chaf1bQ9D0N7 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Chaf1bQ9D0N7 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Chaf1bQ9D0N7 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Chaf1bQ9D0N7 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
Chaf1bQ9D0N7 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Chaf1bQ9D0N7 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC14.63□□□□□ -0.07
Chaf1bQ9D0N7 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Chaf1bQ9D0N7 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Chaf1bQ9D0N7 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Chaf1bQ9D0N7 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Chaf1bQ9D0N7 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chaf1bQ9D0N7 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chaf1bQ9D0N7 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Chaf1bQ9D0N7 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Chaf1bQ9D0N7 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Chaf1bQ9D0N7 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Chaf1bQ9D0N7 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chaf1bQ9D0N7 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chaf1bQ9D0N7 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chaf1bQ9D0N7 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.62□□□□□ -0.07
Chaf1bQ9D0N7 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chaf1bQ9D0N7 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chaf1bQ9D0N7 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chaf1bQ9D0N7 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC14.62□□□□□ -0.07
Chaf1bQ9D0N7 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC14.62□□□□□ -0.07
Chaf1bQ9D0N7 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Chaf1bQ9D0N7 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.62□□□□□ -0.07
Chaf1bQ9D0N7 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chaf1bQ9D0N7 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.62□□□□□ -0.07
Chaf1bQ9D0N7 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chaf1bQ9D0N7 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
Chaf1bQ9D0N7 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC14.62□□□□□ -0.07
Chaf1bQ9D0N7 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chaf1bQ9D0N7 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Chaf1bQ9D0N7 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chaf1bQ9D0N7 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chaf1bQ9D0N7 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Chaf1bQ9D0N7 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chaf1bQ9D0N7 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Chaf1bQ9D0N7 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chaf1bQ9D0N7 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chaf1bQ9D0N7 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chaf1bQ9D0N7 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chaf1bQ9D0N7 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Chaf1bQ9D0N7 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chaf1bQ9D0N7 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Chaf1bQ9D0N7 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.61□□□□□ -0.07
Chaf1bQ9D0N7 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chaf1bQ9D0N7 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Chaf1bQ9D0N7 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chaf1bQ9D0N7 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
Chaf1bQ9D0N7 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chaf1bQ9D0N7 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chaf1bQ9D0N7 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chaf1bQ9D0N7 Gm9889-202ENSMUST00000206983 1577 ntBASIC14.61□□□□□ -0.07
Chaf1bQ9D0N7 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chaf1bQ9D0N7 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chaf1bQ9D0N7 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chaf1bQ9D0N7 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC14.61□□□□□ -0.07
Chaf1bQ9D0N7 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC14.61□□□□□ -0.07
Chaf1bQ9D0N7 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chaf1bQ9D0N7 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Chaf1bQ9D0N7 Gm10812-201ENSMUST00000099864 546 ntBASIC14.61□□□□□ -0.07
Chaf1bQ9D0N7 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chaf1bQ9D0N7 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Chaf1bQ9D0N7 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
Chaf1bQ9D0N7 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chaf1bQ9D0N7 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms