Protein–RNA interactions for Protein: Q9CYI0

Protein Njmu-R1, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CYI0 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Q9CYI0 Gm11873-201ENSMUST00000117877 1304 ntBASIC17.14■□□□□ 0.33
Q9CYI0 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Q9CYI0 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC17.14■□□□□ 0.33
Q9CYI0 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Q9CYI0 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Q9CYI0 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Q9CYI0 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Q9CYI0 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Q9CYI0 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Q9CYI0 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Q9CYI0 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Q9CYI0 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Q9CYI0 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Q9CYI0 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Q9CYI0 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Q9CYI0 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Q9CYI0 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Q9CYI0 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC17.13■□□□□ 0.33
Q9CYI0 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Q9CYI0 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC17.13■□□□□ 0.33
Q9CYI0 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Q9CYI0 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC17.13■□□□□ 0.33
Q9CYI0 Gm37153-201ENSMUST00000193637 231 ntBASIC17.13■□□□□ 0.33
Q9CYI0 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Q9CYI0 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Q9CYI0 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Q9CYI0 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Q9CYI0 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Q9CYI0 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Q9CYI0 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Q9CYI0 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Q9CYI0 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Q9CYI0 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Q9CYI0 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Q9CYI0 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC17.13■□□□□ 0.33
Q9CYI0 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC17.13■□□□□ 0.33
Q9CYI0 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Q9CYI0 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Q9CYI0 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Q9CYI0 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q9CYI0 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q9CYI0 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q9CYI0 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q9CYI0 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Q9CYI0 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q9CYI0 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q9CYI0 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q9CYI0 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Q9CYI0 Gm7669-201ENSMUST00000210184 1603 ntBASIC17.12■□□□□ 0.33
Q9CYI0 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
Q9CYI0 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q9CYI0 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC17.12■□□□□ 0.33
Q9CYI0 Gm6736-201ENSMUST00000166583 948 ntBASIC17.12■□□□□ 0.33
Q9CYI0 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Q9CYI0 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Q9CYI0 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q9CYI0 AC158538.2-201ENSMUST00000225455 906 ntBASIC17.12■□□□□ 0.33
Q9CYI0 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q9CYI0 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q9CYI0 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Q9CYI0 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q9CYI0 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q9CYI0 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q9CYI0 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q9CYI0 Gm16011-201ENSMUST00000121567 2662 ntBASIC17.12■□□□□ 0.33
Q9CYI0 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Q9CYI0 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q9CYI0 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
Q9CYI0 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q9CYI0 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q9CYI0 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q9CYI0 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q9CYI0 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.11■□□□□ 0.33
Q9CYI0 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q9CYI0 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC17.11■□□□□ 0.33
Q9CYI0 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Q9CYI0 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q9CYI0 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC17.11■□□□□ 0.33
Q9CYI0 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC17.11■□□□□ 0.33
Q9CYI0 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC17.11■□□□□ 0.33
Q9CYI0 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Q9CYI0 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC17.11■□□□□ 0.33
Q9CYI0 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q9CYI0 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q9CYI0 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Q9CYI0 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
Q9CYI0 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q9CYI0 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q9CYI0 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Q9CYI0 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Q9CYI0 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Q9CYI0 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q9CYI0 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q9CYI0 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q9CYI0 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q9CYI0 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q9CYI0 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q9CYI0 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q9CYI0 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms