Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim13Q9CYB0 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim13Q9CYB0 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim13Q9CYB0 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trim13Q9CYB0 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Trim13Q9CYB0 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim13Q9CYB0 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim13Q9CYB0 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.39□□□□□ -0.11
Trim13Q9CYB0 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim13Q9CYB0 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim13Q9CYB0 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim13Q9CYB0 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trim13Q9CYB0 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim13Q9CYB0 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Trim13Q9CYB0 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Trim13Q9CYB0 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.38□□□□□ -0.11
Trim13Q9CYB0 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim13Q9CYB0 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim13Q9CYB0 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.38□□□□□ -0.11
Trim13Q9CYB0 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim13Q9CYB0 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim13Q9CYB0 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trim13Q9CYB0 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.38□□□□□ -0.11
Trim13Q9CYB0 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.38□□□□□ -0.11
Trim13Q9CYB0 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim13Q9CYB0 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim13Q9CYB0 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trim13Q9CYB0 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.38□□□□□ -0.11
Trim13Q9CYB0 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Trim13Q9CYB0 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC14.38□□□□□ -0.11
Trim13Q9CYB0 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC14.38□□□□□ -0.11
Trim13Q9CYB0 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim13Q9CYB0 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC14.38□□□□□ -0.11
Trim13Q9CYB0 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim13Q9CYB0 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim13Q9CYB0 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim13Q9CYB0 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trim13Q9CYB0 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim13Q9CYB0 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.38□□□□□ -0.11
Trim13Q9CYB0 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.38□□□□□ -0.11
Trim13Q9CYB0 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim13Q9CYB0 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim13Q9CYB0 BC037039-201ENSMUST00000192003 2205 ntBASIC14.38□□□□□ -0.11
Trim13Q9CYB0 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim13Q9CYB0 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim13Q9CYB0 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim13Q9CYB0 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trim13Q9CYB0 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.38□□□□□ -0.11
Trim13Q9CYB0 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim13Q9CYB0 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.38□□□□□ -0.11
Trim13Q9CYB0 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC14.37□□□□□ -0.11
Trim13Q9CYB0 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Trim13Q9CYB0 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.37□□□□□ -0.11
Trim13Q9CYB0 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trim13Q9CYB0 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim13Q9CYB0 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Trim13Q9CYB0 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC14.37□□□□□ -0.11
Trim13Q9CYB0 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trim13Q9CYB0 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC14.37□□□□□ -0.11
Trim13Q9CYB0 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim13Q9CYB0 Gm5417-201ENSMUST00000079706 384 ntBASIC14.37□□□□□ -0.11
Trim13Q9CYB0 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim13Q9CYB0 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim13Q9CYB0 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim13Q9CYB0 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trim13Q9CYB0 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim13Q9CYB0 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim13Q9CYB0 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim13Q9CYB0 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trim13Q9CYB0 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim13Q9CYB0 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim13Q9CYB0 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trim13Q9CYB0 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim13Q9CYB0 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim13Q9CYB0 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim13Q9CYB0 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.36□□□□□ -0.11
Trim13Q9CYB0 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim13Q9CYB0 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim13Q9CYB0 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim13Q9CYB0 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim13Q9CYB0 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim13Q9CYB0 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim13Q9CYB0 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim13Q9CYB0 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.36□□□□□ -0.11
Trim13Q9CYB0 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim13Q9CYB0 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim13Q9CYB0 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim13Q9CYB0 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim13Q9CYB0 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim13Q9CYB0 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim13Q9CYB0 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim13Q9CYB0 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Trim13Q9CYB0 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim13Q9CYB0 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Trim13Q9CYB0 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim13Q9CYB0 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.35□□□□□ -0.11
Trim13Q9CYB0 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim13Q9CYB0 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim13Q9CYB0 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim13Q9CYB0 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms