Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ssr1Q9CY50 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ssr1Q9CY50 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ssr1Q9CY50 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ssr1Q9CY50 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
Ssr1Q9CY50 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ssr1Q9CY50 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ssr1Q9CY50 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Ssr1Q9CY50 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.87■□□□□ 0.29
Ssr1Q9CY50 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ssr1Q9CY50 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ssr1Q9CY50 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ssr1Q9CY50 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.87■□□□□ 0.29
Ssr1Q9CY50 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ssr1Q9CY50 Gm9013-201ENSMUST00000132939 882 ntBASIC16.87■□□□□ 0.29
Ssr1Q9CY50 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Ssr1Q9CY50 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ssr1Q9CY50 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ssr1Q9CY50 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ssr1Q9CY50 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ssr1Q9CY50 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ssr1Q9CY50 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC16.87■□□□□ 0.29
Ssr1Q9CY50 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ssr1Q9CY50 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ssr1Q9CY50 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ssr1Q9CY50 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.87■□□□□ 0.29
Ssr1Q9CY50 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.87■□□□□ 0.29
Ssr1Q9CY50 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ssr1Q9CY50 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ssr1Q9CY50 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ssr1Q9CY50 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ssr1Q9CY50 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ssr1Q9CY50 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Ssr1Q9CY50 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Ssr1Q9CY50 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ssr1Q9CY50 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ssr1Q9CY50 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.86■□□□□ 0.29
Ssr1Q9CY50 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ssr1Q9CY50 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Ssr1Q9CY50 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ssr1Q9CY50 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ssr1Q9CY50 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Ssr1Q9CY50 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ssr1Q9CY50 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ssr1Q9CY50 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ssr1Q9CY50 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ssr1Q9CY50 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
Ssr1Q9CY50 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ssr1Q9CY50 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ssr1Q9CY50 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ssr1Q9CY50 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ssr1Q9CY50 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ssr1Q9CY50 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.85■□□□□ 0.29
Ssr1Q9CY50 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ssr1Q9CY50 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
Ssr1Q9CY50 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ssr1Q9CY50 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.85■□□□□ 0.29
Ssr1Q9CY50 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC16.85■□□□□ 0.29
Ssr1Q9CY50 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ssr1Q9CY50 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.85■□□□□ 0.29
Ssr1Q9CY50 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ssr1Q9CY50 Gm5587-201ENSMUST00000206270 674 ntBASIC16.85■□□□□ 0.29
Ssr1Q9CY50 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Ssr1Q9CY50 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ssr1Q9CY50 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ssr1Q9CY50 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ssr1Q9CY50 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Ssr1Q9CY50 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ssr1Q9CY50 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ssr1Q9CY50 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ssr1Q9CY50 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Ssr1Q9CY50 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ssr1Q9CY50 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ssr1Q9CY50 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.84■□□□□ 0.29
Ssr1Q9CY50 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC16.84■□□□□ 0.29
Ssr1Q9CY50 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ssr1Q9CY50 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC16.84■□□□□ 0.29
Ssr1Q9CY50 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ssr1Q9CY50 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ssr1Q9CY50 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ssr1Q9CY50 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ssr1Q9CY50 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ssr1Q9CY50 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ssr1Q9CY50 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ssr1Q9CY50 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ssr1Q9CY50 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Ssr1Q9CY50 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ssr1Q9CY50 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Ssr1Q9CY50 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ssr1Q9CY50 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ssr1Q9CY50 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ssr1Q9CY50 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Ssr1Q9CY50 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ssr1Q9CY50 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ssr1Q9CY50 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ssr1Q9CY50 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Ssr1Q9CY50 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.84■□□□□ 0.29
Ssr1Q9CY50 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ssr1Q9CY50 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ssr1Q9CY50 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms