Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Col25a1Q99MQ5 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Col25a1Q99MQ5 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC16.04■□□□□ 0.16
Col25a1Q99MQ5 Gm12859-201ENSMUST00000117834 427 ntBASIC16.04■□□□□ 0.16
Col25a1Q99MQ5 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Col25a1Q99MQ5 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col25a1Q99MQ5 Gm45059-201ENSMUST00000205558 1077 ntBASIC16.04■□□□□ 0.16
Col25a1Q99MQ5 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.04■□□□□ 0.16
Col25a1Q99MQ5 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col25a1Q99MQ5 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Col25a1Q99MQ5 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Col25a1Q99MQ5 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Col25a1Q99MQ5 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col25a1Q99MQ5 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Col25a1Q99MQ5 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col25a1Q99MQ5 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col25a1Q99MQ5 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Col25a1Q99MQ5 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col25a1Q99MQ5 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col25a1Q99MQ5 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col25a1Q99MQ5 Best4-ps-201ENSMUST00000129783 1380 ntBASIC16.03■□□□□ 0.16
Col25a1Q99MQ5 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col25a1Q99MQ5 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Col25a1Q99MQ5 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col25a1Q99MQ5 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Col25a1Q99MQ5 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col25a1Q99MQ5 Gm25287-201ENSMUST00000103846 110 ntBASIC16.03■□□□□ 0.16
Col25a1Q99MQ5 Gm22918-201ENSMUST00000103855 110 ntBASIC16.03■□□□□ 0.16
Col25a1Q99MQ5 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC16.03■□□□□ 0.16
Col25a1Q99MQ5 Gm15693-201ENSMUST00000120470 637 ntBASIC16.03■□□□□ 0.16
Col25a1Q99MQ5 Gm14719-201ENSMUST00000121891 340 ntBASIC16.03■□□□□ 0.16
Col25a1Q99MQ5 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
Col25a1Q99MQ5 AC131710.1-201ENSMUST00000228336 990 ntBASIC16.03■□□□□ 0.16
Col25a1Q99MQ5 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col25a1Q99MQ5 Gm6180-201ENSMUST00000065243 498 ntBASIC16.03■□□□□ 0.16
Col25a1Q99MQ5 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Col25a1Q99MQ5 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Col25a1Q99MQ5 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col25a1Q99MQ5 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.03■□□□□ 0.16
Col25a1Q99MQ5 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.03■□□□□ 0.16
Col25a1Q99MQ5 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col25a1Q99MQ5 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col25a1Q99MQ5 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col25a1Q99MQ5 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Col25a1Q99MQ5 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col25a1Q99MQ5 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.03■□□□□ 0.16
Col25a1Q99MQ5 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Col25a1Q99MQ5 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Col25a1Q99MQ5 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col25a1Q99MQ5 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Col25a1Q99MQ5 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col25a1Q99MQ5 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Col25a1Q99MQ5 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col25a1Q99MQ5 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col25a1Q99MQ5 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Col25a1Q99MQ5 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Col25a1Q99MQ5 Syt7-204ENSMUST00000223586 1344 ntBASIC16.02■□□□□ 0.16
Col25a1Q99MQ5 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col25a1Q99MQ5 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col25a1Q99MQ5 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col25a1Q99MQ5 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
Col25a1Q99MQ5 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC16.02■□□□□ 0.16
Col25a1Q99MQ5 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Col25a1Q99MQ5 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Col25a1Q99MQ5 Gm8515-201ENSMUST00000194852 576 ntBASIC16.02■□□□□ 0.16
Col25a1Q99MQ5 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC16.02■□□□□ 0.16
Col25a1Q99MQ5 Gm9257-201ENSMUST00000221254 232 ntBASIC16.02■□□□□ 0.16
Col25a1Q99MQ5 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col25a1Q99MQ5 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Col25a1Q99MQ5 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col25a1Q99MQ5 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Col25a1Q99MQ5 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col25a1Q99MQ5 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Col25a1Q99MQ5 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
Col25a1Q99MQ5 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Col25a1Q99MQ5 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Col25a1Q99MQ5 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Col25a1Q99MQ5 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Col25a1Q99MQ5 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
Col25a1Q99MQ5 Gm3365-201ENSMUST00000216296 1480 ntBASIC16.02■□□□□ 0.15
Col25a1Q99MQ5 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Col25a1Q99MQ5 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Col25a1Q99MQ5 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Col25a1Q99MQ5 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Col25a1Q99MQ5 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Col25a1Q99MQ5 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Col25a1Q99MQ5 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col25a1Q99MQ5 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col25a1Q99MQ5 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Col25a1Q99MQ5 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col25a1Q99MQ5 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col25a1Q99MQ5 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Col25a1Q99MQ5 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC16.01■□□□□ 0.15
Col25a1Q99MQ5 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col25a1Q99MQ5 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC16.01■□□□□ 0.15
Col25a1Q99MQ5 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Col25a1Q99MQ5 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC16.01■□□□□ 0.15
Col25a1Q99MQ5 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col25a1Q99MQ5 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
Col25a1Q99MQ5 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 11 ms