Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.09■□□□□ 0.01
Rnf111Q99ML9 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Rnf111Q99ML9 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf111Q99ML9 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
Rnf111Q99ML9 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf111Q99ML9 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf111Q99ML9 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf111Q99ML9 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf111Q99ML9 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rnf111Q99ML9 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.08■□□□□ 0.01
Rnf111Q99ML9 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.08■□□□□ 0.01
Rnf111Q99ML9 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Rnf111Q99ML9 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rnf111Q99ML9 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rnf111Q99ML9 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Rnf111Q99ML9 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rnf111Q99ML9 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC15.08■□□□□ 0
Rnf111Q99ML9 Gm14859-201ENSMUST00000117752 357 ntBASIC15.08■□□□□ 0
Rnf111Q99ML9 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Rnf111Q99ML9 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Rnf111Q99ML9 Gm10459-201ENSMUST00000202708 1155 ntBASIC15.08■□□□□ 0
Rnf111Q99ML9 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Rnf111Q99ML9 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Rnf111Q99ML9 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rnf111Q99ML9 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rnf111Q99ML9 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rnf111Q99ML9 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rnf111Q99ML9 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Rnf111Q99ML9 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Rnf111Q99ML9 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rnf111Q99ML9 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf111Q99ML9 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf111Q99ML9 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf111Q99ML9 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf111Q99ML9 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf111Q99ML9 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf111Q99ML9 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.07■□□□□ 0
Rnf111Q99ML9 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.07■□□□□ 0
Rnf111Q99ML9 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf111Q99ML9 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf111Q99ML9 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.07■□□□□ 0
Rnf111Q99ML9 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf111Q99ML9 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf111Q99ML9 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf111Q99ML9 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rnf111Q99ML9 Olfr129-201ENSMUST00000122318 993 ntBASIC15.07■□□□□ 0
Rnf111Q99ML9 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC15.07■□□□□ 0
Rnf111Q99ML9 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rnf111Q99ML9 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf111Q99ML9 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC15.07■□□□□ 0
Rnf111Q99ML9 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf111Q99ML9 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf111Q99ML9 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf111Q99ML9 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf111Q99ML9 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
Rnf111Q99ML9 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Rnf111Q99ML9 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf111Q99ML9 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf111Q99ML9 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Rnf111Q99ML9 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rnf111Q99ML9 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf111Q99ML9 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf111Q99ML9 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Rnf111Q99ML9 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf111Q99ML9 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rnf111Q99ML9 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Rnf111Q99ML9 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rnf111Q99ML9 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf111Q99ML9 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf111Q99ML9 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf111Q99ML9 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC15.06■□□□□ 0
Rnf111Q99ML9 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf111Q99ML9 AC114585.2-202ENSMUST00000228094 426 ntBASIC15.06■□□□□ 0
Rnf111Q99ML9 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf111Q99ML9 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf111Q99ML9 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf111Q99ML9 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rnf111Q99ML9 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rnf111Q99ML9 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf111Q99ML9 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf111Q99ML9 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
Rnf111Q99ML9 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf111Q99ML9 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC15.05■□□□□ 0
Rnf111Q99ML9 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC15.05■□□□□ 0
Rnf111Q99ML9 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC15.05■□□□□ 0
Rnf111Q99ML9 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Rnf111Q99ML9 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Rnf111Q99ML9 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Rnf111Q99ML9 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
Rnf111Q99ML9 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.05■□□□□ -0
Rnf111Q99ML9 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rnf111Q99ML9 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC15.05■□□□□ -0
Rnf111Q99ML9 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rnf111Q99ML9 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC15.05■□□□□ -0
Rnf111Q99ML9 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Rnf111Q99ML9 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rnf111Q99ML9 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC15.05■□□□□ -0
Rnf111Q99ML9 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rnf111Q99ML9 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rnf111Q99ML9 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms