Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Scrt1Q99M85 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scrt1Q99M85 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scrt1Q99M85 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scrt1Q99M85 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Scrt1Q99M85 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scrt1Q99M85 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scrt1Q99M85 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scrt1Q99M85 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Scrt1Q99M85 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scrt1Q99M85 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scrt1Q99M85 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scrt1Q99M85 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Scrt1Q99M85 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Scrt1Q99M85 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scrt1Q99M85 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
Scrt1Q99M85 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scrt1Q99M85 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Scrt1Q99M85 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scrt1Q99M85 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Scrt1Q99M85 Gm27300-201ENSMUST00000184085 97 ntBASIC13.59□□□□□ -0.23
Scrt1Q99M85 Gm27335-201ENSMUST00000184758 97 ntBASIC13.59□□□□□ -0.23
Scrt1Q99M85 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC13.59□□□□□ -0.23
Scrt1Q99M85 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
Scrt1Q99M85 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC13.59□□□□□ -0.23
Scrt1Q99M85 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Scrt1Q99M85 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC13.59□□□□□ -0.23
Scrt1Q99M85 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scrt1Q99M85 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scrt1Q99M85 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scrt1Q99M85 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scrt1Q99M85 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Scrt1Q99M85 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scrt1Q99M85 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scrt1Q99M85 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Scrt1Q99M85 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC13.59□□□□□ -0.23
Scrt1Q99M85 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scrt1Q99M85 Gm44616-201ENSMUST00000206417 1732 ntBASIC13.59□□□□□ -0.23
Scrt1Q99M85 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Scrt1Q99M85 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Scrt1Q99M85 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
Scrt1Q99M85 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scrt1Q99M85 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scrt1Q99M85 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scrt1Q99M85 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scrt1Q99M85 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Scrt1Q99M85 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC13.58□□□□□ -0.24
Scrt1Q99M85 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC13.58□□□□□ -0.24
Scrt1Q99M85 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scrt1Q99M85 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC13.58□□□□□ -0.24
Scrt1Q99M85 AC131709.1-201ENSMUST00000224731 1180 ntBASIC13.58□□□□□ -0.24
Scrt1Q99M85 AC124549.3-201ENSMUST00000225541 367 ntBASIC13.58□□□□□ -0.24
Scrt1Q99M85 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scrt1Q99M85 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scrt1Q99M85 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scrt1Q99M85 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Scrt1Q99M85 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Scrt1Q99M85 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scrt1Q99M85 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scrt1Q99M85 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC13.58□□□□□ -0.24
Scrt1Q99M85 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scrt1Q99M85 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scrt1Q99M85 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scrt1Q99M85 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scrt1Q99M85 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scrt1Q99M85 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Scrt1Q99M85 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scrt1Q99M85 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scrt1Q99M85 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Scrt1Q99M85 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Scrt1Q99M85 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scrt1Q99M85 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
Scrt1Q99M85 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scrt1Q99M85 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scrt1Q99M85 Gm8784-201ENSMUST00000222096 1435 ntBASIC13.57□□□□□ -0.24
Scrt1Q99M85 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scrt1Q99M85 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scrt1Q99M85 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scrt1Q99M85 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scrt1Q99M85 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scrt1Q99M85 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scrt1Q99M85 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
Scrt1Q99M85 Gm11025-201ENSMUST00000140773 466 ntBASIC13.57□□□□□ -0.24
Scrt1Q99M85 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC13.57□□□□□ -0.24
Scrt1Q99M85 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
Scrt1Q99M85 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC13.57□□□□□ -0.24
Scrt1Q99M85 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC13.57□□□□□ -0.24
Scrt1Q99M85 Gm18622-201ENSMUST00000219361 595 ntBASIC13.57□□□□□ -0.24
Scrt1Q99M85 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Scrt1Q99M85 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scrt1Q99M85 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scrt1Q99M85 Gm8396-201ENSMUST00000057361 823 ntBASIC13.57□□□□□ -0.24
Scrt1Q99M85 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scrt1Q99M85 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC13.57□□□□□ -0.24
Scrt1Q99M85 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scrt1Q99M85 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scrt1Q99M85 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scrt1Q99M85 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scrt1Q99M85 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Scrt1Q99M85 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms