Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Clp1Q99LI9 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clp1Q99LI9 Gm7901-201ENSMUST00000120430 1597 ntBASIC16.34■□□□□ 0.21
Clp1Q99LI9 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clp1Q99LI9 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Clp1Q99LI9 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Clp1Q99LI9 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Clp1Q99LI9 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clp1Q99LI9 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Clp1Q99LI9 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Clp1Q99LI9 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Clp1Q99LI9 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.33■□□□□ 0.21
Clp1Q99LI9 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Clp1Q99LI9 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Clp1Q99LI9 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Clp1Q99LI9 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Clp1Q99LI9 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Clp1Q99LI9 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Clp1Q99LI9 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Clp1Q99LI9 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clp1Q99LI9 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.33■□□□□ 0.2
Clp1Q99LI9 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clp1Q99LI9 Gm6973-201ENSMUST00000117080 721 ntBASIC16.33■□□□□ 0.2
Clp1Q99LI9 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Clp1Q99LI9 Gm23547-201ENSMUST00000158210 271 ntBASIC16.33■□□□□ 0.2
Clp1Q99LI9 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Clp1Q99LI9 Gm10499-201ENSMUST00000174094 934 ntBASIC16.33■□□□□ 0.2
Clp1Q99LI9 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC16.33■□□□□ 0.2
Clp1Q99LI9 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clp1Q99LI9 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clp1Q99LI9 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clp1Q99LI9 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
Clp1Q99LI9 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clp1Q99LI9 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clp1Q99LI9 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clp1Q99LI9 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clp1Q99LI9 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Clp1Q99LI9 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clp1Q99LI9 Gm13337-201ENSMUST00000119183 1594 ntBASIC16.33■□□□□ 0.2
Clp1Q99LI9 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clp1Q99LI9 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clp1Q99LI9 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Clp1Q99LI9 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clp1Q99LI9 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clp1Q99LI9 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clp1Q99LI9 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clp1Q99LI9 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clp1Q99LI9 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clp1Q99LI9 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC16.32■□□□□ 0.2
Clp1Q99LI9 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Clp1Q99LI9 Gm27437-201ENSMUST00000183429 107 ntBASIC16.32■□□□□ 0.2
Clp1Q99LI9 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC16.32■□□□□ 0.2
Clp1Q99LI9 Gm7669-201ENSMUST00000210184 1603 ntBASIC16.32■□□□□ 0.2
Clp1Q99LI9 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clp1Q99LI9 AC166341.4-201ENSMUST00000220625 123 ntBASIC16.32■□□□□ 0.2
Clp1Q99LI9 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clp1Q99LI9 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clp1Q99LI9 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clp1Q99LI9 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clp1Q99LI9 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clp1Q99LI9 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clp1Q99LI9 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clp1Q99LI9 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
Clp1Q99LI9 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Clp1Q99LI9 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Clp1Q99LI9 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clp1Q99LI9 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clp1Q99LI9 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Clp1Q99LI9 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clp1Q99LI9 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Clp1Q99LI9 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Clp1Q99LI9 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clp1Q99LI9 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Clp1Q99LI9 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clp1Q99LI9 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Clp1Q99LI9 Gm27306-201ENSMUST00000183970 107 ntBASIC16.31■□□□□ 0.2
Clp1Q99LI9 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clp1Q99LI9 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC16.31■□□□□ 0.2
Clp1Q99LI9 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC16.31■□□□□ 0.2
Clp1Q99LI9 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Clp1Q99LI9 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clp1Q99LI9 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clp1Q99LI9 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clp1Q99LI9 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.31■□□□□ 0.2
Clp1Q99LI9 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clp1Q99LI9 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Clp1Q99LI9 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Clp1Q99LI9 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clp1Q99LI9 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Clp1Q99LI9 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.31■□□□□ 0.2
Clp1Q99LI9 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clp1Q99LI9 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Clp1Q99LI9 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clp1Q99LI9 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clp1Q99LI9 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clp1Q99LI9 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clp1Q99LI9 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Clp1Q99LI9 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clp1Q99LI9 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clp1Q99LI9 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms