Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Cstf1Q99LC2 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cstf1Q99LC2 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cstf1Q99LC2 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cstf1Q99LC2 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cstf1Q99LC2 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.49■□□□□ 0.07
Cstf1Q99LC2 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cstf1Q99LC2 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cstf1Q99LC2 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cstf1Q99LC2 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cstf1Q99LC2 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Cstf1Q99LC2 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Cstf1Q99LC2 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cstf1Q99LC2 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
Cstf1Q99LC2 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Cstf1Q99LC2 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Cstf1Q99LC2 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cstf1Q99LC2 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC15.48■□□□□ 0.07
Cstf1Q99LC2 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC15.48■□□□□ 0.07
Cstf1Q99LC2 Gm23547-201ENSMUST00000158210 271 ntBASIC15.48■□□□□ 0.07
Cstf1Q99LC2 Gm5628-201ENSMUST00000222318 1049 ntBASIC15.48■□□□□ 0.07
Cstf1Q99LC2 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Cstf1Q99LC2 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cstf1Q99LC2 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cstf1Q99LC2 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Cstf1Q99LC2 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Cstf1Q99LC2 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.48■□□□□ 0.07
Cstf1Q99LC2 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cstf1Q99LC2 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cstf1Q99LC2 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Cstf1Q99LC2 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
Cstf1Q99LC2 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC15.47■□□□□ 0.07
Cstf1Q99LC2 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cstf1Q99LC2 Gm13294-201ENSMUST00000121757 1330 ntBASIC15.47■□□□□ 0.07
Cstf1Q99LC2 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Cstf1Q99LC2 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cstf1Q99LC2 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Cstf1Q99LC2 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.47■□□□□ 0.07
Cstf1Q99LC2 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cstf1Q99LC2 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cstf1Q99LC2 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.47■□□□□ 0.07
Cstf1Q99LC2 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Cstf1Q99LC2 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cstf1Q99LC2 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC15.47■□□□□ 0.07
Cstf1Q99LC2 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC15.47■□□□□ 0.07
Cstf1Q99LC2 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Cstf1Q99LC2 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cstf1Q99LC2 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Cstf1Q99LC2 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cstf1Q99LC2 Gm27622-201ENSMUST00000183779 60 ntBASIC15.47■□□□□ 0.07
Cstf1Q99LC2 Gm7774-201ENSMUST00000200064 533 ntBASIC15.47■□□□□ 0.07
Cstf1Q99LC2 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC15.47■□□□□ 0.07
Cstf1Q99LC2 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cstf1Q99LC2 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cstf1Q99LC2 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Cstf1Q99LC2 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cstf1Q99LC2 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Cstf1Q99LC2 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC15.47■□□□□ 0.07
Cstf1Q99LC2 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Cstf1Q99LC2 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cstf1Q99LC2 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cstf1Q99LC2 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cstf1Q99LC2 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cstf1Q99LC2 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC15.46■□□□□ 0.07
Cstf1Q99LC2 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cstf1Q99LC2 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Cstf1Q99LC2 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cstf1Q99LC2 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cstf1Q99LC2 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cstf1Q99LC2 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Cstf1Q99LC2 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cstf1Q99LC2 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cstf1Q99LC2 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cstf1Q99LC2 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cstf1Q99LC2 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC15.46■□□□□ 0.07
Cstf1Q99LC2 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC15.46■□□□□ 0.07
Cstf1Q99LC2 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC15.46■□□□□ 0.07
Cstf1Q99LC2 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cstf1Q99LC2 Gpr146-202ENSMUST00000053120 1040 ntBASIC15.46■□□□□ 0.07
Cstf1Q99LC2 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
Cstf1Q99LC2 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.46■□□□□ 0.07
Cstf1Q99LC2 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cstf1Q99LC2 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cstf1Q99LC2 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cstf1Q99LC2 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Cstf1Q99LC2 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
Cstf1Q99LC2 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.46■□□□□ 0.06
Cstf1Q99LC2 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.46■□□□□ 0.06
Cstf1Q99LC2 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Cstf1Q99LC2 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Cstf1Q99LC2 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cstf1Q99LC2 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cstf1Q99LC2 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cstf1Q99LC2 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Cstf1Q99LC2 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cstf1Q99LC2 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.45■□□□□ 0.06
Cstf1Q99LC2 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Cstf1Q99LC2 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Cstf1Q99LC2 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Cstf1Q99LC2 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC15.45■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 93.4 ms