Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha11Q91Y19 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha11Q91Y19 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha11Q91Y19 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha11Q91Y19 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha11Q91Y19 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC16.31■□□□□ 0.2
Pcdha11Q91Y19 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha11Q91Y19 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha11Q91Y19 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha11Q91Y19 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha11Q91Y19 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdha11Q91Y19 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdha11Q91Y19 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdha11Q91Y19 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdha11Q91Y19 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdha11Q91Y19 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdha11Q91Y19 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdha11Q91Y19 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdha11Q91Y19 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdha11Q91Y19 Gm7286-201ENSMUST00000182691 1007 ntBASIC16.3■□□□□ 0.2
Pcdha11Q91Y19 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC16.3■□□□□ 0.2
Pcdha11Q91Y19 AC154222.1-201ENSMUST00000223882 475 ntBASIC16.3■□□□□ 0.2
Pcdha11Q91Y19 AC151836.1-202ENSMUST00000226259 753 ntBASIC16.3■□□□□ 0.2
Pcdha11Q91Y19 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Pcdha11Q91Y19 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdha11Q91Y19 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdha11Q91Y19 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdha11Q91Y19 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdha11Q91Y19 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC16.29■□□□□ 0.2
Pcdha11Q91Y19 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.29■□□□□ 0.2
Pcdha11Q91Y19 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha11Q91Y19 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha11Q91Y19 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha11Q91Y19 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Pcdha11Q91Y19 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC16.29■□□□□ 0.2
Pcdha11Q91Y19 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha11Q91Y19 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC16.29■□□□□ 0.2
Pcdha11Q91Y19 Gm45167-201ENSMUST00000208007 322 ntBASIC16.29■□□□□ 0.2
Pcdha11Q91Y19 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha11Q91Y19 Psmb5-202ENSMUST00000227257 622 ntBASIC16.29■□□□□ 0.2
Pcdha11Q91Y19 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha11Q91Y19 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Pcdha11Q91Y19 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Pcdha11Q91Y19 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha11Q91Y19 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Pcdha11Q91Y19 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha11Q91Y19 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha11Q91Y19 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha11Q91Y19 Gm13337-201ENSMUST00000119183 1594 ntBASIC16.29■□□□□ 0.2
Pcdha11Q91Y19 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha11Q91Y19 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC16.29■□□□□ 0.2
Pcdha11Q91Y19 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdha11Q91Y19 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdha11Q91Y19 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdha11Q91Y19 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Pcdha11Q91Y19 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC16.28■□□□□ 0.2
Pcdha11Q91Y19 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdha11Q91Y19 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
Pcdha11Q91Y19 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Pcdha11Q91Y19 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC16.28■□□□□ 0.2
Pcdha11Q91Y19 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC16.28■□□□□ 0.2
Pcdha11Q91Y19 Gm5253-201ENSMUST00000187104 1025 ntBASIC16.28■□□□□ 0.2
Pcdha11Q91Y19 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC16.28■□□□□ 0.2
Pcdha11Q91Y19 Gm43935-201ENSMUST00000203569 1050 ntBASIC16.28■□□□□ 0.2
Pcdha11Q91Y19 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC16.28■□□□□ 0.2
Pcdha11Q91Y19 Gm7787-201ENSMUST00000216858 688 ntBASIC16.28■□□□□ 0.2
Pcdha11Q91Y19 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC16.28■□□□□ 0.2
Pcdha11Q91Y19 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Pcdha11Q91Y19 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdha11Q91Y19 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdha11Q91Y19 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdha11Q91Y19 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdha11Q91Y19 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdha11Q91Y19 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdha11Q91Y19 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdha11Q91Y19 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdha11Q91Y19 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC16.28■□□□□ 0.2
Pcdha11Q91Y19 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Pcdha11Q91Y19 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Pcdha11Q91Y19 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdha11Q91Y19 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdha11Q91Y19 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdha11Q91Y19 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdha11Q91Y19 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
Pcdha11Q91Y19 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdha11Q91Y19 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdha11Q91Y19 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
Pcdha11Q91Y19 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Pcdha11Q91Y19 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdha11Q91Y19 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdha11Q91Y19 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdha11Q91Y19 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdha11Q91Y19 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdha11Q91Y19 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdha11Q91Y19 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC16.27■□□□□ 0.2
Pcdha11Q91Y19 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdha11Q91Y19 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC16.27■□□□□ 0.2
Pcdha11Q91Y19 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdha11Q91Y19 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdha11Q91Y19 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms