Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
Pcdhb3Q91XZ7 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb3Q91XZ7 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC15.57■□□□□ 0.08
Pcdhb3Q91XZ7 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb3Q91XZ7 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb3Q91XZ7 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb3Q91XZ7 Spsb2-203ENSMUST00000112473 1322 ntBASIC15.57■□□□□ 0.08
Pcdhb3Q91XZ7 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb3Q91XZ7 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb3Q91XZ7 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb3Q91XZ7 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb3Q91XZ7 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb3Q91XZ7 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb3Q91XZ7 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb3Q91XZ7 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb3Q91XZ7 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb3Q91XZ7 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Pcdhb3Q91XZ7 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb3Q91XZ7 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC15.56■□□□□ 0.08
Pcdhb3Q91XZ7 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb3Q91XZ7 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb3Q91XZ7 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb3Q91XZ7 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb3Q91XZ7 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb3Q91XZ7 Efs-202ENSMUST00000227037 2540 ntBASIC15.56■□□□□ 0.08
Pcdhb3Q91XZ7 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb3Q91XZ7 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Pcdhb3Q91XZ7 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Pcdhb3Q91XZ7 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
Pcdhb3Q91XZ7 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb3Q91XZ7 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Pcdhb3Q91XZ7 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC15.56■□□□□ 0.08
Pcdhb3Q91XZ7 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC15.56■□□□□ 0.08
Pcdhb3Q91XZ7 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb3Q91XZ7 Gm7367-201ENSMUST00000057611 492 ntBASIC15.56■□□□□ 0.08
Pcdhb3Q91XZ7 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb3Q91XZ7 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Pcdhb3Q91XZ7 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb3Q91XZ7 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb3Q91XZ7 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb3Q91XZ7 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb3Q91XZ7 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb3Q91XZ7 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb3Q91XZ7 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb3Q91XZ7 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Pcdhb3Q91XZ7 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
Pcdhb3Q91XZ7 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Pcdhb3Q91XZ7 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb3Q91XZ7 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb3Q91XZ7 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb3Q91XZ7 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb3Q91XZ7 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.56■□□□□ 0.08
Pcdhb3Q91XZ7 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb3Q91XZ7 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb3Q91XZ7 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb3Q91XZ7 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb3Q91XZ7 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb3Q91XZ7 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb3Q91XZ7 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Pcdhb3Q91XZ7 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb3Q91XZ7 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb3Q91XZ7 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Pcdhb3Q91XZ7 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Pcdhb3Q91XZ7 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb3Q91XZ7 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb3Q91XZ7 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC15.55■□□□□ 0.08
Pcdhb3Q91XZ7 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb3Q91XZ7 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb3Q91XZ7 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb3Q91XZ7 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC15.55■□□□□ 0.08
Pcdhb3Q91XZ7 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Pcdhb3Q91XZ7 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb3Q91XZ7 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC15.55■□□□□ 0.08
Pcdhb3Q91XZ7 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC15.55■□□□□ 0.08
Pcdhb3Q91XZ7 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC15.55■□□□□ 0.08
Pcdhb3Q91XZ7 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Pcdhb3Q91XZ7 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb3Q91XZ7 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb3Q91XZ7 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb3Q91XZ7 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb3Q91XZ7 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb3Q91XZ7 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Pcdhb3Q91XZ7 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb3Q91XZ7 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb3Q91XZ7 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb3Q91XZ7 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb3Q91XZ7 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Pcdhb3Q91XZ7 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb3Q91XZ7 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb3Q91XZ7 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb3Q91XZ7 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb3Q91XZ7 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Pcdhb3Q91XZ7 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb3Q91XZ7 Gm38116-201ENSMUST00000193873 1533 ntBASIC15.54■□□□□ 0.08
Pcdhb3Q91XZ7 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Pcdhb3Q91XZ7 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb3Q91XZ7 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC15.54■□□□□ 0.08
Pcdhb3Q91XZ7 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb3Q91XZ7 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb3Q91XZ7 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms