Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Trex1Q91XB0 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trex1Q91XB0 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trex1Q91XB0 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trex1Q91XB0 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trex1Q91XB0 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC17.72■□□□□ 0.43
Trex1Q91XB0 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC17.72■□□□□ 0.43
Trex1Q91XB0 Gm13616-201ENSMUST00000120600 222 ntBASIC17.72■□□□□ 0.43
Trex1Q91XB0 Mir6956-201ENSMUST00000183598 62 ntBASIC17.72■□□□□ 0.43
Trex1Q91XB0 Gm5312-201ENSMUST00000203728 547 ntBASIC17.72■□□□□ 0.43
Trex1Q91XB0 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC17.72■□□□□ 0.43
Trex1Q91XB0 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trex1Q91XB0 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trex1Q91XB0 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trex1Q91XB0 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
Trex1Q91XB0 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC17.72■□□□□ 0.43
Trex1Q91XB0 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Trex1Q91XB0 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trex1Q91XB0 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Trex1Q91XB0 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Trex1Q91XB0 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trex1Q91XB0 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trex1Q91XB0 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC17.72■□□□□ 0.43
Trex1Q91XB0 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trex1Q91XB0 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trex1Q91XB0 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.72■□□□□ 0.43
Trex1Q91XB0 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trex1Q91XB0 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trex1Q91XB0 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Trex1Q91XB0 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Trex1Q91XB0 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trex1Q91XB0 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.71■□□□□ 0.43
Trex1Q91XB0 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trex1Q91XB0 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trex1Q91XB0 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trex1Q91XB0 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trex1Q91XB0 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC17.71■□□□□ 0.43
Trex1Q91XB0 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trex1Q91XB0 Mir6990-201ENSMUST00000183724 91 ntBASIC17.71■□□□□ 0.43
Trex1Q91XB0 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trex1Q91XB0 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC17.71■□□□□ 0.43
Trex1Q91XB0 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC17.71■□□□□ 0.43
Trex1Q91XB0 Gm44872-201ENSMUST00000207864 420 ntBASIC17.71■□□□□ 0.43
Trex1Q91XB0 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC17.71■□□□□ 0.43
Trex1Q91XB0 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC17.71■□□□□ 0.43
Trex1Q91XB0 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trex1Q91XB0 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Trex1Q91XB0 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trex1Q91XB0 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trex1Q91XB0 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trex1Q91XB0 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trex1Q91XB0 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trex1Q91XB0 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trex1Q91XB0 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trex1Q91XB0 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trex1Q91XB0 Gm13410-201ENSMUST00000117058 1415 ntBASIC17.71■□□□□ 0.43
Trex1Q91XB0 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Trex1Q91XB0 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Trex1Q91XB0 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trex1Q91XB0 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Trex1Q91XB0 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Trex1Q91XB0 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trex1Q91XB0 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trex1Q91XB0 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC17.7■□□□□ 0.42
Trex1Q91XB0 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trex1Q91XB0 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trex1Q91XB0 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
Trex1Q91XB0 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trex1Q91XB0 Rprl2-201ENSMUST00000157150 290 ntBASIC17.7■□□□□ 0.42
Trex1Q91XB0 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC17.7■□□□□ 0.42
Trex1Q91XB0 Gm18889-201ENSMUST00000174284 929 ntBASIC17.7■□□□□ 0.42
Trex1Q91XB0 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trex1Q91XB0 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Trex1Q91XB0 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trex1Q91XB0 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trex1Q91XB0 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trex1Q91XB0 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trex1Q91XB0 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trex1Q91XB0 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trex1Q91XB0 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trex1Q91XB0 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trex1Q91XB0 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trex1Q91XB0 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Trex1Q91XB0 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Trex1Q91XB0 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trex1Q91XB0 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trex1Q91XB0 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trex1Q91XB0 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trex1Q91XB0 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trex1Q91XB0 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trex1Q91XB0 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Trex1Q91XB0 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.69■□□□□ 0.42
Trex1Q91XB0 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Trex1Q91XB0 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trex1Q91XB0 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Trex1Q91XB0 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC17.69■□□□□ 0.42
Trex1Q91XB0 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC17.69■□□□□ 0.42
Trex1Q91XB0 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Trex1Q91XB0 Gm43474-201ENSMUST00000196415 774 ntBASIC17.69■□□□□ 0.42
Trex1Q91XB0 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms