Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim60Q8VI40 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim60Q8VI40 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim60Q8VI40 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Trim60Q8VI40 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim60Q8VI40 Gm10584-201ENSMUST00000207036 2628 ntBASIC16.08■□□□□ 0.16
Trim60Q8VI40 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim60Q8VI40 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim60Q8VI40 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC16.08■□□□□ 0.16
Trim60Q8VI40 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim60Q8VI40 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC16.07■□□□□ 0.16
Trim60Q8VI40 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim60Q8VI40 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trim60Q8VI40 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trim60Q8VI40 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim60Q8VI40 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trim60Q8VI40 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trim60Q8VI40 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim60Q8VI40 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim60Q8VI40 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.07■□□□□ 0.16
Trim60Q8VI40 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Trim60Q8VI40 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC16.07■□□□□ 0.16
Trim60Q8VI40 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim60Q8VI40 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trim60Q8VI40 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim60Q8VI40 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim60Q8VI40 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim60Q8VI40 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.07■□□□□ 0.16
Trim60Q8VI40 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trim60Q8VI40 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC16.07■□□□□ 0.16
Trim60Q8VI40 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim60Q8VI40 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim60Q8VI40 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim60Q8VI40 Prkcz2-201ENSMUST00000206136 1756 ntBASIC16.07■□□□□ 0.16
Trim60Q8VI40 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim60Q8VI40 Gm11839-201ENSMUST00000120647 1953 ntBASIC16.07■□□□□ 0.16
Trim60Q8VI40 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trim60Q8VI40 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trim60Q8VI40 AC154412.1-201ENSMUST00000226540 2786 ntBASIC16.07■□□□□ 0.16
Trim60Q8VI40 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim60Q8VI40 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim60Q8VI40 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trim60Q8VI40 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim60Q8VI40 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim60Q8VI40 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim60Q8VI40 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim60Q8VI40 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim60Q8VI40 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trim60Q8VI40 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim60Q8VI40 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trim60Q8VI40 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim60Q8VI40 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim60Q8VI40 Gm6345-202ENSMUST00000180900 204 ntBASIC16.06■□□□□ 0.16
Trim60Q8VI40 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trim60Q8VI40 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Trim60Q8VI40 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim60Q8VI40 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim60Q8VI40 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim60Q8VI40 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim60Q8VI40 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim60Q8VI40 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim60Q8VI40 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim60Q8VI40 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim60Q8VI40 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim60Q8VI40 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim60Q8VI40 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim60Q8VI40 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim60Q8VI40 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Trim60Q8VI40 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim60Q8VI40 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim60Q8VI40 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Trim60Q8VI40 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trim60Q8VI40 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim60Q8VI40 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trim60Q8VI40 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
Trim60Q8VI40 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
Trim60Q8VI40 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim60Q8VI40 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
Trim60Q8VI40 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.05■□□□□ 0.16
Trim60Q8VI40 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Trim60Q8VI40 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Trim60Q8VI40 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.05■□□□□ 0.16
Trim60Q8VI40 Rprl3-201ENSMUST00000157400 290 ntBASIC16.05■□□□□ 0.16
Trim60Q8VI40 Gm10231-201ENSMUST00000181584 441 ntBASIC16.05■□□□□ 0.16
Trim60Q8VI40 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim60Q8VI40 Gm10175-202ENSMUST00000208752 441 ntBASIC16.05■□□□□ 0.16
Trim60Q8VI40 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim60Q8VI40 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim60Q8VI40 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim60Q8VI40 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Trim60Q8VI40 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trim60Q8VI40 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim60Q8VI40 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim60Q8VI40 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Trim60Q8VI40 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim60Q8VI40 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim60Q8VI40 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Trim60Q8VI40 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trim60Q8VI40 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim60Q8VI40 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 97.3 ms