Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Lsm1Q8VC85 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Lsm1Q8VC85 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lsm1Q8VC85 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Lsm1Q8VC85 Gm44454-201ENSMUST00000198541 138 ntBASIC14.91□□□□□ -0.02
Lsm1Q8VC85 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Lsm1Q8VC85 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lsm1Q8VC85 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lsm1Q8VC85 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
Lsm1Q8VC85 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Lsm1Q8VC85 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lsm1Q8VC85 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lsm1Q8VC85 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lsm1Q8VC85 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.91□□□□□ -0.02
Lsm1Q8VC85 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.91□□□□□ -0.02
Lsm1Q8VC85 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lsm1Q8VC85 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Lsm1Q8VC85 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lsm1Q8VC85 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lsm1Q8VC85 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Lsm1Q8VC85 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lsm1Q8VC85 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lsm1Q8VC85 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lsm1Q8VC85 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Lsm1Q8VC85 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.9□□□□□ -0.02
Lsm1Q8VC85 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Lsm1Q8VC85 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lsm1Q8VC85 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lsm1Q8VC85 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lsm1Q8VC85 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lsm1Q8VC85 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lsm1Q8VC85 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.9□□□□□ -0.02
Lsm1Q8VC85 Gm27742-201ENSMUST00000184667 60 ntBASIC14.9□□□□□ -0.02
Lsm1Q8VC85 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Lsm1Q8VC85 Gm9172-201ENSMUST00000212092 954 ntBASIC14.9□□□□□ -0.02
Lsm1Q8VC85 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.9□□□□□ -0.02
Lsm1Q8VC85 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.9□□□□□ -0.02
Lsm1Q8VC85 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC14.9□□□□□ -0.02
Lsm1Q8VC85 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lsm1Q8VC85 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Lsm1Q8VC85 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lsm1Q8VC85 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lsm1Q8VC85 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Lsm1Q8VC85 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lsm1Q8VC85 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lsm1Q8VC85 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lsm1Q8VC85 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Lsm1Q8VC85 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.9□□□□□ -0.02
Lsm1Q8VC85 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.89□□□□□ -0.03
Lsm1Q8VC85 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Lsm1Q8VC85 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.89□□□□□ -0.03
Lsm1Q8VC85 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lsm1Q8VC85 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.89□□□□□ -0.03
Lsm1Q8VC85 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lsm1Q8VC85 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lsm1Q8VC85 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lsm1Q8VC85 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.89□□□□□ -0.03
Lsm1Q8VC85 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.89□□□□□ -0.03
Lsm1Q8VC85 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC14.89□□□□□ -0.03
Lsm1Q8VC85 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Lsm1Q8VC85 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Lsm1Q8VC85 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC14.89□□□□□ -0.03
Lsm1Q8VC85 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
Lsm1Q8VC85 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Lsm1Q8VC85 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lsm1Q8VC85 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Lsm1Q8VC85 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lsm1Q8VC85 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lsm1Q8VC85 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Lsm1Q8VC85 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lsm1Q8VC85 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.89□□□□□ -0.03
Lsm1Q8VC85 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lsm1Q8VC85 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.89□□□□□ -0.03
Lsm1Q8VC85 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lsm1Q8VC85 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lsm1Q8VC85 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lsm1Q8VC85 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Lsm1Q8VC85 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lsm1Q8VC85 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lsm1Q8VC85 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lsm1Q8VC85 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lsm1Q8VC85 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Lsm1Q8VC85 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lsm1Q8VC85 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lsm1Q8VC85 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lsm1Q8VC85 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Lsm1Q8VC85 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lsm1Q8VC85 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lsm1Q8VC85 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lsm1Q8VC85 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Lsm1Q8VC85 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lsm1Q8VC85 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Lsm1Q8VC85 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Lsm1Q8VC85 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC14.88□□□□□ -0.03
Lsm1Q8VC85 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.88□□□□□ -0.03
Lsm1Q8VC85 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Lsm1Q8VC85 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lsm1Q8VC85 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lsm1Q8VC85 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Lsm1Q8VC85 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms