Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC18.74■□□□□ 0.59
Ccdc9Q8VC31 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc9Q8VC31 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc9Q8VC31 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc9Q8VC31 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc9Q8VC31 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc9Q8VC31 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc9Q8VC31 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc9Q8VC31 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Ccdc9Q8VC31 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc9Q8VC31 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc9Q8VC31 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc9Q8VC31 Efs-202ENSMUST00000227037 2540 ntBASIC18.73■□□□□ 0.59
Ccdc9Q8VC31 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc9Q8VC31 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc9Q8VC31 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Ccdc9Q8VC31 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc9Q8VC31 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc9Q8VC31 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc9Q8VC31 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Ccdc9Q8VC31 Rbfox2-206ENSMUST00000227314 1810 ntBASIC18.73■□□□□ 0.59
Ccdc9Q8VC31 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc9Q8VC31 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc9Q8VC31 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Ccdc9Q8VC31 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc9Q8VC31 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.73■□□□□ 0.59
Ccdc9Q8VC31 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc9Q8VC31 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc9Q8VC31 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc9Q8VC31 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc9Q8VC31 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc9Q8VC31 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Ccdc9Q8VC31 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc9Q8VC31 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc9Q8VC31 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc9Q8VC31 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Ccdc9Q8VC31 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc9Q8VC31 Camk2g-217ENSMUST00000226630 1937 ntBASIC18.72■□□□□ 0.59
Ccdc9Q8VC31 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Ccdc9Q8VC31 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc9Q8VC31 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc9Q8VC31 Nupl1-207ENSMUST00000225311 2475 ntBASIC18.72■□□□□ 0.59
Ccdc9Q8VC31 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc9Q8VC31 Gm11927-201ENSMUST00000118472 759 ntBASIC18.72■□□□□ 0.59
Ccdc9Q8VC31 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.72■□□□□ 0.59
Ccdc9Q8VC31 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
Ccdc9Q8VC31 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc9Q8VC31 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc9Q8VC31 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Ccdc9Q8VC31 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc9Q8VC31 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
Ccdc9Q8VC31 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc9Q8VC31 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc9Q8VC31 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc9Q8VC31 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Ccdc9Q8VC31 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Ccdc9Q8VC31 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
Ccdc9Q8VC31 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc9Q8VC31 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC18.71■□□□□ 0.59
Ccdc9Q8VC31 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC18.71■□□□□ 0.59
Ccdc9Q8VC31 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc9Q8VC31 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc9Q8VC31 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc9Q8VC31 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC18.71■□□□□ 0.59
Ccdc9Q8VC31 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc9Q8VC31 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.71■□□□□ 0.59
Ccdc9Q8VC31 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC18.71■□□□□ 0.59
Ccdc9Q8VC31 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
Ccdc9Q8VC31 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC18.71■□□□□ 0.59
Ccdc9Q8VC31 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Ccdc9Q8VC31 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC18.71■□□□□ 0.59
Ccdc9Q8VC31 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc9Q8VC31 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc9Q8VC31 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc9Q8VC31 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc9Q8VC31 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc9Q8VC31 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc9Q8VC31 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc9Q8VC31 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc9Q8VC31 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc9Q8VC31 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc9Q8VC31 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
Ccdc9Q8VC31 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Ccdc9Q8VC31 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.58
Ccdc9Q8VC31 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc9Q8VC31 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
Ccdc9Q8VC31 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc9Q8VC31 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc9Q8VC31 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc9Q8VC31 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc9Q8VC31 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc9Q8VC31 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc9Q8VC31 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc9Q8VC31 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC18.7■□□□□ 0.58
Ccdc9Q8VC31 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Ccdc9Q8VC31 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
Ccdc9Q8VC31 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc9Q8VC31 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc9Q8VC31 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc9Q8VC31 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms