Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC18.58■□□□□ 0.56
Top1mtQ8R4U6 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Top1mtQ8R4U6 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Top1mtQ8R4U6 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Top1mtQ8R4U6 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Top1mtQ8R4U6 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Top1mtQ8R4U6 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Top1mtQ8R4U6 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Top1mtQ8R4U6 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Top1mtQ8R4U6 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Top1mtQ8R4U6 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Top1mtQ8R4U6 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Top1mtQ8R4U6 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC18.57■□□□□ 0.56
Top1mtQ8R4U6 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Top1mtQ8R4U6 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC18.57■□□□□ 0.56
Top1mtQ8R4U6 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC18.57■□□□□ 0.56
Top1mtQ8R4U6 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC18.57■□□□□ 0.56
Top1mtQ8R4U6 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Top1mtQ8R4U6 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC18.57■□□□□ 0.56
Top1mtQ8R4U6 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC18.57■□□□□ 0.56
Top1mtQ8R4U6 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Top1mtQ8R4U6 AC159093.1-201ENSMUST00000227779 380 ntBASIC18.57■□□□□ 0.56
Top1mtQ8R4U6 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Top1mtQ8R4U6 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Top1mtQ8R4U6 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Top1mtQ8R4U6 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Top1mtQ8R4U6 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Top1mtQ8R4U6 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Top1mtQ8R4U6 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Top1mtQ8R4U6 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
Top1mtQ8R4U6 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Top1mtQ8R4U6 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC18.56■□□□□ 0.56
Top1mtQ8R4U6 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Top1mtQ8R4U6 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Top1mtQ8R4U6 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Top1mtQ8R4U6 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Top1mtQ8R4U6 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Top1mtQ8R4U6 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Top1mtQ8R4U6 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC18.56■□□□□ 0.56
Top1mtQ8R4U6 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Top1mtQ8R4U6 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Top1mtQ8R4U6 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Top1mtQ8R4U6 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC18.56■□□□□ 0.56
Top1mtQ8R4U6 Gm14722-201ENSMUST00000118943 689 ntBASIC18.56■□□□□ 0.56
Top1mtQ8R4U6 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Top1mtQ8R4U6 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Top1mtQ8R4U6 Gm37584-201ENSMUST00000193595 1290 ntBASIC18.56■□□□□ 0.56
Top1mtQ8R4U6 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Top1mtQ8R4U6 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC18.56■□□□□ 0.56
Top1mtQ8R4U6 AC160980.1-201ENSMUST00000224136 970 ntBASIC18.56■□□□□ 0.56
Top1mtQ8R4U6 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Top1mtQ8R4U6 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
Top1mtQ8R4U6 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Top1mtQ8R4U6 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Top1mtQ8R4U6 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Top1mtQ8R4U6 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Top1mtQ8R4U6 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Top1mtQ8R4U6 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Top1mtQ8R4U6 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Top1mtQ8R4U6 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Top1mtQ8R4U6 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
Top1mtQ8R4U6 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Top1mtQ8R4U6 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Top1mtQ8R4U6 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Top1mtQ8R4U6 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Top1mtQ8R4U6 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Top1mtQ8R4U6 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Top1mtQ8R4U6 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
Top1mtQ8R4U6 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Top1mtQ8R4U6 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Top1mtQ8R4U6 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC18.55■□□□□ 0.56
Top1mtQ8R4U6 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC18.55■□□□□ 0.56
Top1mtQ8R4U6 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC18.55■□□□□ 0.56
Top1mtQ8R4U6 Gm44357-201ENSMUST00000195897 142 ntBASIC18.55■□□□□ 0.56
Top1mtQ8R4U6 Gm19658-201ENSMUST00000196231 138 ntBASIC18.55■□□□□ 0.56
Top1mtQ8R4U6 Gm44367-201ENSMUST00000196836 138 ntBASIC18.55■□□□□ 0.56
Top1mtQ8R4U6 Gm44350-201ENSMUST00000197197 138 ntBASIC18.55■□□□□ 0.56
Top1mtQ8R4U6 Gm44390-201ENSMUST00000197533 144 ntBASIC18.55■□□□□ 0.56
Top1mtQ8R4U6 Gm44313-201ENSMUST00000198018 138 ntBASIC18.55■□□□□ 0.56
Top1mtQ8R4U6 Gm44486-201ENSMUST00000198508 138 ntBASIC18.55■□□□□ 0.56
Top1mtQ8R4U6 Gm44314-201ENSMUST00000199263 138 ntBASIC18.55■□□□□ 0.56
Top1mtQ8R4U6 Gm44394-201ENSMUST00000199558 138 ntBASIC18.55■□□□□ 0.56
Top1mtQ8R4U6 Gm44484-201ENSMUST00000199873 138 ntBASIC18.55■□□□□ 0.56
Top1mtQ8R4U6 Gm43347-201ENSMUST00000200226 580 ntBASIC18.55■□□□□ 0.56
Top1mtQ8R4U6 Gm44466-201ENSMUST00000200264 138 ntBASIC18.55■□□□□ 0.56
Top1mtQ8R4U6 Gm44359-201ENSMUST00000200671 138 ntBASIC18.55■□□□□ 0.56
Top1mtQ8R4U6 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Top1mtQ8R4U6 AC158538.2-201ENSMUST00000225455 906 ntBASIC18.55■□□□□ 0.56
Top1mtQ8R4U6 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Top1mtQ8R4U6 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Top1mtQ8R4U6 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Top1mtQ8R4U6 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Top1mtQ8R4U6 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Top1mtQ8R4U6 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Top1mtQ8R4U6 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Top1mtQ8R4U6 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Top1mtQ8R4U6 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Top1mtQ8R4U6 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Top1mtQ8R4U6 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Top1mtQ8R4U6 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms