Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Gm34391-201ENSMUST00000203706 907 ntBASIC18.33■□□□□ 0.52
Atf7Q8R0S1 AC093926.2-201ENSMUST00000214468 1228 ntBASIC18.33■□□□□ 0.52
Atf7Q8R0S1 Birc2-201ENSMUST00000054878 378 ntBASIC18.33■□□□□ 0.52
Atf7Q8R0S1 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Atf7Q8R0S1 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Atf7Q8R0S1 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Atf7Q8R0S1 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Atf7Q8R0S1 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
Atf7Q8R0S1 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Atf7Q8R0S1 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Atf7Q8R0S1 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Atf7Q8R0S1 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atf7Q8R0S1 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC18.32■□□□□ 0.52
Atf7Q8R0S1 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Atf7Q8R0S1 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atf7Q8R0S1 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atf7Q8R0S1 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Atf7Q8R0S1 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Atf7Q8R0S1 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Atf7Q8R0S1 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atf7Q8R0S1 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atf7Q8R0S1 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Atf7Q8R0S1 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC18.32■□□□□ 0.52
Atf7Q8R0S1 Gm37584-201ENSMUST00000193595 1290 ntBASIC18.32■□□□□ 0.52
Atf7Q8R0S1 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Atf7Q8R0S1 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atf7Q8R0S1 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atf7Q8R0S1 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Atf7Q8R0S1 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atf7Q8R0S1 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Atf7Q8R0S1 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Atf7Q8R0S1 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Atf7Q8R0S1 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atf7Q8R0S1 Gm45212-201ENSMUST00000205831 3403 ntBASIC18.32■□□□□ 0.52
Atf7Q8R0S1 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atf7Q8R0S1 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atf7Q8R0S1 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atf7Q8R0S1 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atf7Q8R0S1 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Atf7Q8R0S1 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Atf7Q8R0S1 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC18.31■□□□□ 0.52
Atf7Q8R0S1 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atf7Q8R0S1 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC18.31■□□□□ 0.52
Atf7Q8R0S1 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC18.31■□□□□ 0.52
Atf7Q8R0S1 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atf7Q8R0S1 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atf7Q8R0S1 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atf7Q8R0S1 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atf7Q8R0S1 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atf7Q8R0S1 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atf7Q8R0S1 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atf7Q8R0S1 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atf7Q8R0S1 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atf7Q8R0S1 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atf7Q8R0S1 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atf7Q8R0S1 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Atf7Q8R0S1 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
Atf7Q8R0S1 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atf7Q8R0S1 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atf7Q8R0S1 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atf7Q8R0S1 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
Atf7Q8R0S1 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC18.3■□□□□ 0.52
Atf7Q8R0S1 Gm11780-201ENSMUST00000136880 516 ntBASIC18.3■□□□□ 0.52
Atf7Q8R0S1 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Atf7Q8R0S1 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC18.3■□□□□ 0.52
Atf7Q8R0S1 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC18.3■□□□□ 0.52
Atf7Q8R0S1 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC18.3■□□□□ 0.52
Atf7Q8R0S1 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC18.3■□□□□ 0.52
Atf7Q8R0S1 AC159301.1-201ENSMUST00000225130 1182 ntBASIC18.3■□□□□ 0.52
Atf7Q8R0S1 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atf7Q8R0S1 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atf7Q8R0S1 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atf7Q8R0S1 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Atf7Q8R0S1 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Atf7Q8R0S1 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC18.3■□□□□ 0.52
Atf7Q8R0S1 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atf7Q8R0S1 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Atf7Q8R0S1 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atf7Q8R0S1 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC18.29■□□□□ 0.52
Atf7Q8R0S1 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atf7Q8R0S1 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
Atf7Q8R0S1 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atf7Q8R0S1 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atf7Q8R0S1 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Atf7Q8R0S1 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atf7Q8R0S1 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atf7Q8R0S1 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC18.29■□□□□ 0.52
Atf7Q8R0S1 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atf7Q8R0S1 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atf7Q8R0S1 Gm4535-201ENSMUST00000182274 558 ntBASIC18.29■□□□□ 0.52
Atf7Q8R0S1 Gm44357-201ENSMUST00000195897 142 ntBASIC18.29■□□□□ 0.52
Atf7Q8R0S1 Gm19658-201ENSMUST00000196231 138 ntBASIC18.29■□□□□ 0.52
Atf7Q8R0S1 Gm44367-201ENSMUST00000196836 138 ntBASIC18.29■□□□□ 0.52
Atf7Q8R0S1 Gm44350-201ENSMUST00000197197 138 ntBASIC18.29■□□□□ 0.52
Atf7Q8R0S1 Gm44390-201ENSMUST00000197533 144 ntBASIC18.29■□□□□ 0.52
Atf7Q8R0S1 Gm44313-201ENSMUST00000198018 138 ntBASIC18.29■□□□□ 0.52
Atf7Q8R0S1 Gm44486-201ENSMUST00000198508 138 ntBASIC18.29■□□□□ 0.52
Atf7Q8R0S1 Gm44314-201ENSMUST00000199263 138 ntBASIC18.29■□□□□ 0.52
Atf7Q8R0S1 Gm44394-201ENSMUST00000199558 138 ntBASIC18.29■□□□□ 0.52
Atf7Q8R0S1 Gm44484-201ENSMUST00000199873 138 ntBASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms