Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Ddx54Q8K4L0 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC20.23■□□□□ 0.83
Ddx54Q8K4L0 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ddx54Q8K4L0 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ddx54Q8K4L0 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Ddx54Q8K4L0 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ddx54Q8K4L0 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ddx54Q8K4L0 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ddx54Q8K4L0 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ddx54Q8K4L0 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ddx54Q8K4L0 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ddx54Q8K4L0 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ddx54Q8K4L0 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Ddx54Q8K4L0 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC20.22■□□□□ 0.83
Ddx54Q8K4L0 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC20.22■□□□□ 0.83
Ddx54Q8K4L0 Gm15483-201ENSMUST00000120338 456 ntBASIC20.22■□□□□ 0.83
Ddx54Q8K4L0 Gm15321-201ENSMUST00000121290 288 ntBASIC20.22■□□□□ 0.83
Ddx54Q8K4L0 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC20.22■□□□□ 0.83
Ddx54Q8K4L0 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ddx54Q8K4L0 Gm8116-201ENSMUST00000182917 1201 ntBASIC20.22■□□□□ 0.83
Ddx54Q8K4L0 Gm44344-201ENSMUST00000200287 129 ntBASIC20.22■□□□□ 0.83
Ddx54Q8K4L0 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Ddx54Q8K4L0 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ddx54Q8K4L0 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ddx54Q8K4L0 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ddx54Q8K4L0 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Ddx54Q8K4L0 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Ddx54Q8K4L0 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ddx54Q8K4L0 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.21■□□□□ 0.83
Ddx54Q8K4L0 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC20.21■□□□□ 0.83
Ddx54Q8K4L0 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Ddx54Q8K4L0 Mir6420-201ENSMUST00000185032 102 ntBASIC20.21■□□□□ 0.83
Ddx54Q8K4L0 Gm18766-201ENSMUST00000189811 808 ntBASIC20.21■□□□□ 0.83
Ddx54Q8K4L0 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ddx54Q8K4L0 Rassf8-202ENSMUST00000058538 1131 ntBASIC20.21■□□□□ 0.83
Ddx54Q8K4L0 Gm6180-201ENSMUST00000065243 498 ntBASIC20.21■□□□□ 0.83
Ddx54Q8K4L0 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ddx54Q8K4L0 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ddx54Q8K4L0 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ddx54Q8K4L0 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ddx54Q8K4L0 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ddx54Q8K4L0 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ddx54Q8K4L0 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC20.21■□□□□ 0.83
Ddx54Q8K4L0 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ddx54Q8K4L0 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ddx54Q8K4L0 AC154231.1-201ENSMUST00000220564 2175 ntBASIC20.21■□□□□ 0.83
Ddx54Q8K4L0 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ddx54Q8K4L0 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Ddx54Q8K4L0 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx54Q8K4L0 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC20.2■□□□□ 0.82
Ddx54Q8K4L0 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx54Q8K4L0 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
Ddx54Q8K4L0 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx54Q8K4L0 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx54Q8K4L0 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC20.2■□□□□ 0.82
Ddx54Q8K4L0 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx54Q8K4L0 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx54Q8K4L0 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC20.2■□□□□ 0.82
Ddx54Q8K4L0 Gm9899-201ENSMUST00000065519 555 ntBASIC20.2■□□□□ 0.82
Ddx54Q8K4L0 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx54Q8K4L0 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
Ddx54Q8K4L0 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx54Q8K4L0 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx54Q8K4L0 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC20.19■□□□□ 0.82
Ddx54Q8K4L0 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ddx54Q8K4L0 Gm11841-201ENSMUST00000117060 1963 ntBASIC20.19■□□□□ 0.82
Ddx54Q8K4L0 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
Ddx54Q8K4L0 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Ddx54Q8K4L0 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Ddx54Q8K4L0 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC20.19■□□□□ 0.82
Ddx54Q8K4L0 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ddx54Q8K4L0 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ddx54Q8K4L0 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC20.19■□□□□ 0.82
Ddx54Q8K4L0 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC20.19■□□□□ 0.82
Ddx54Q8K4L0 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ddx54Q8K4L0 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ddx54Q8K4L0 Gm8602-201ENSMUST00000184045 607 ntBASIC20.19■□□□□ 0.82
Ddx54Q8K4L0 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC20.19■□□□□ 0.82
Ddx54Q8K4L0 Gm18062-201ENSMUST00000208020 547 ntBASIC20.19■□□□□ 0.82
Ddx54Q8K4L0 Gm18055-201ENSMUST00000208254 547 ntBASIC20.19■□□□□ 0.82
Ddx54Q8K4L0 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ddx54Q8K4L0 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ddx54Q8K4L0 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ddx54Q8K4L0 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ddx54Q8K4L0 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ddx54Q8K4L0 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Ddx54Q8K4L0 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ddx54Q8K4L0 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ddx54Q8K4L0 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ddx54Q8K4L0 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ddx54Q8K4L0 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Ddx54Q8K4L0 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ddx54Q8K4L0 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC20.18■□□□□ 0.82
Ddx54Q8K4L0 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC20.18■□□□□ 0.82
Ddx54Q8K4L0 Gm16026-204ENSMUST00000162652 683 ntBASIC20.18■□□□□ 0.82
Ddx54Q8K4L0 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ddx54Q8K4L0 Gm27533-201ENSMUST00000183800 152 ntBASIC20.18■□□□□ 0.82
Ddx54Q8K4L0 Gm27680-201ENSMUST00000184192 160 ntBASIC20.18■□□□□ 0.82
Ddx54Q8K4L0 Gm45059-201ENSMUST00000205558 1077 ntBASIC20.18■□□□□ 0.82
Ddx54Q8K4L0 Gm44719-201ENSMUST00000206404 149 ntBASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms