Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smc5Q8CG46 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Smc5Q8CG46 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smc5Q8CG46 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smc5Q8CG46 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smc5Q8CG46 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smc5Q8CG46 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Smc5Q8CG46 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smc5Q8CG46 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Smc5Q8CG46 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
Smc5Q8CG46 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Smc5Q8CG46 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC19.21■□□□□ 0.67
Smc5Q8CG46 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smc5Q8CG46 Olfr129-201ENSMUST00000122318 993 ntBASIC19.21■□□□□ 0.67
Smc5Q8CG46 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Smc5Q8CG46 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Smc5Q8CG46 Mir3081-201ENSMUST00000175305 84 ntBASIC19.21■□□□□ 0.67
Smc5Q8CG46 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Smc5Q8CG46 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Smc5Q8CG46 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smc5Q8CG46 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Smc5Q8CG46 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smc5Q8CG46 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smc5Q8CG46 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smc5Q8CG46 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smc5Q8CG46 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smc5Q8CG46 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC19.21■□□□□ 0.67
Smc5Q8CG46 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smc5Q8CG46 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC19.21■□□□□ 0.67
Smc5Q8CG46 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
Smc5Q8CG46 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC19.21■□□□□ 0.66
Smc5Q8CG46 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
Smc5Q8CG46 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smc5Q8CG46 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smc5Q8CG46 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smc5Q8CG46 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smc5Q8CG46 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smc5Q8CG46 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Smc5Q8CG46 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smc5Q8CG46 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC19.2■□□□□ 0.66
Smc5Q8CG46 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC19.2■□□□□ 0.66
Smc5Q8CG46 Gm9172-201ENSMUST00000212092 954 ntBASIC19.2■□□□□ 0.66
Smc5Q8CG46 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Smc5Q8CG46 AC117588.1-201ENSMUST00000228510 999 ntBASIC19.2■□□□□ 0.66
Smc5Q8CG46 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smc5Q8CG46 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smc5Q8CG46 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Smc5Q8CG46 Gm14780-201ENSMUST00000118387 2737 ntBASIC19.2■□□□□ 0.66
Smc5Q8CG46 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smc5Q8CG46 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smc5Q8CG46 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smc5Q8CG46 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smc5Q8CG46 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smc5Q8CG46 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Smc5Q8CG46 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smc5Q8CG46 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Smc5Q8CG46 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smc5Q8CG46 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Smc5Q8CG46 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Smc5Q8CG46 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC19.19■□□□□ 0.66
Smc5Q8CG46 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smc5Q8CG46 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smc5Q8CG46 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smc5Q8CG46 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smc5Q8CG46 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Smc5Q8CG46 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smc5Q8CG46 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smc5Q8CG46 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smc5Q8CG46 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smc5Q8CG46 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smc5Q8CG46 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smc5Q8CG46 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Smc5Q8CG46 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smc5Q8CG46 Gm45504-201ENSMUST00000211407 2107 ntBASIC19.18■□□□□ 0.66
Smc5Q8CG46 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Smc5Q8CG46 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Smc5Q8CG46 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC19.18■□□□□ 0.66
Smc5Q8CG46 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smc5Q8CG46 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC19.18■□□□□ 0.66
Smc5Q8CG46 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Smc5Q8CG46 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Smc5Q8CG46 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Smc5Q8CG46 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Smc5Q8CG46 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Smc5Q8CG46 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smc5Q8CG46 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Smc5Q8CG46 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smc5Q8CG46 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smc5Q8CG46 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smc5Q8CG46 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smc5Q8CG46 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smc5Q8CG46 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Smc5Q8CG46 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Smc5Q8CG46 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smc5Q8CG46 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smc5Q8CG46 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smc5Q8CG46 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smc5Q8CG46 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smc5Q8CG46 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Smc5Q8CG46 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms