Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim52Q8CDV4 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trim52Q8CDV4 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trim52Q8CDV4 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trim52Q8CDV4 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trim52Q8CDV4 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Trim52Q8CDV4 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trim52Q8CDV4 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Trim52Q8CDV4 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trim52Q8CDV4 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trim52Q8CDV4 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC19.08■□□□□ 0.65
Trim52Q8CDV4 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trim52Q8CDV4 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Trim52Q8CDV4 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trim52Q8CDV4 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Trim52Q8CDV4 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC19.08■□□□□ 0.64
Trim52Q8CDV4 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC19.08■□□□□ 0.64
Trim52Q8CDV4 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC19.08■□□□□ 0.64
Trim52Q8CDV4 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC19.08■□□□□ 0.64
Trim52Q8CDV4 Mir6956-201ENSMUST00000183598 62 ntBASIC19.08■□□□□ 0.64
Trim52Q8CDV4 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC19.08■□□□□ 0.64
Trim52Q8CDV4 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim52Q8CDV4 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim52Q8CDV4 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Trim52Q8CDV4 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim52Q8CDV4 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Trim52Q8CDV4 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC19.08■□□□□ 0.64
Trim52Q8CDV4 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Trim52Q8CDV4 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Trim52Q8CDV4 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim52Q8CDV4 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim52Q8CDV4 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC19.07■□□□□ 0.64
Trim52Q8CDV4 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC19.07■□□□□ 0.64
Trim52Q8CDV4 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim52Q8CDV4 AC159114.1-201ENSMUST00000220349 266 ntBASIC19.07■□□□□ 0.64
Trim52Q8CDV4 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Trim52Q8CDV4 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim52Q8CDV4 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim52Q8CDV4 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Trim52Q8CDV4 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim52Q8CDV4 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim52Q8CDV4 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim52Q8CDV4 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim52Q8CDV4 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Trim52Q8CDV4 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim52Q8CDV4 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC19.06■□□□□ 0.64
Trim52Q8CDV4 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim52Q8CDV4 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim52Q8CDV4 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Trim52Q8CDV4 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Trim52Q8CDV4 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trim52Q8CDV4 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC19.06■□□□□ 0.64
Trim52Q8CDV4 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trim52Q8CDV4 AC140397.2-201ENSMUST00000224213 834 ntBASIC19.06■□□□□ 0.64
Trim52Q8CDV4 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC19.06■□□□□ 0.64
Trim52Q8CDV4 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim52Q8CDV4 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC19.06■□□□□ 0.64
Trim52Q8CDV4 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim52Q8CDV4 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim52Q8CDV4 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim52Q8CDV4 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim52Q8CDV4 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trim52Q8CDV4 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim52Q8CDV4 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim52Q8CDV4 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trim52Q8CDV4 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim52Q8CDV4 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim52Q8CDV4 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Trim52Q8CDV4 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim52Q8CDV4 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trim52Q8CDV4 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC19.05■□□□□ 0.64
Trim52Q8CDV4 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trim52Q8CDV4 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC19.05■□□□□ 0.64
Trim52Q8CDV4 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim52Q8CDV4 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Trim52Q8CDV4 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim52Q8CDV4 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC19.05■□□□□ 0.64
Trim52Q8CDV4 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim52Q8CDV4 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC19.04■□□□□ 0.64
Trim52Q8CDV4 Gm22065-201ENSMUST00000103753 110 ntBASIC19.04■□□□□ 0.64
Trim52Q8CDV4 Gm22066-201ENSMUST00000103761 110 ntBASIC19.04■□□□□ 0.64
Trim52Q8CDV4 Gm24932-201ENSMUST00000103763 110 ntBASIC19.04■□□□□ 0.64
Trim52Q8CDV4 Gm24115-201ENSMUST00000103799 110 ntBASIC19.04■□□□□ 0.64
Trim52Q8CDV4 Gm22190-201ENSMUST00000103827 110 ntBASIC19.04■□□□□ 0.64
Trim52Q8CDV4 Gm22191-201ENSMUST00000103831 110 ntBASIC19.04■□□□□ 0.64
Trim52Q8CDV4 Gm24721-201ENSMUST00000103849 110 ntBASIC19.04■□□□□ 0.64
Trim52Q8CDV4 Gm28018-201ENSMUST00000103869 110 ntBASIC19.04■□□□□ 0.64
Trim52Q8CDV4 Gm26399-201ENSMUST00000103937 110 ntBASIC19.04■□□□□ 0.64
Trim52Q8CDV4 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim52Q8CDV4 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC19.04■□□□□ 0.64
Trim52Q8CDV4 Gm25349-201ENSMUST00000177728 110 ntBASIC19.04■□□□□ 0.64
Trim52Q8CDV4 Gm23616-201ENSMUST00000177797 110 ntBASIC19.04■□□□□ 0.64
Trim52Q8CDV4 Gm25871-201ENSMUST00000177816 110 ntBASIC19.04■□□□□ 0.64
Trim52Q8CDV4 Gm24752-201ENSMUST00000178240 110 ntBASIC19.04■□□□□ 0.64
Trim52Q8CDV4 Gm24496-201ENSMUST00000178287 110 ntBASIC19.04■□□□□ 0.64
Trim52Q8CDV4 Gm25649-201ENSMUST00000178476 110 ntBASIC19.04■□□□□ 0.64
Trim52Q8CDV4 Gm25548-201ENSMUST00000178681 110 ntBASIC19.04■□□□□ 0.64
Trim52Q8CDV4 Gm23147-201ENSMUST00000178841 110 ntBASIC19.04■□□□□ 0.64
Trim52Q8CDV4 Gm26095-201ENSMUST00000179270 110 ntBASIC19.04■□□□□ 0.64
Trim52Q8CDV4 Gm22171-201ENSMUST00000179283 110 ntBASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms