Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Ccdc60Q8C4J0 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc60Q8C4J0 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc60Q8C4J0 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc60Q8C4J0 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
Ccdc60Q8C4J0 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc60Q8C4J0 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc60Q8C4J0 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc60Q8C4J0 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC19.79■□□□□ 0.76
Ccdc60Q8C4J0 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc60Q8C4J0 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc60Q8C4J0 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc60Q8C4J0 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc60Q8C4J0 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc60Q8C4J0 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc60Q8C4J0 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc60Q8C4J0 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc60Q8C4J0 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc60Q8C4J0 Gm7222-201ENSMUST00000117512 906 ntBASIC19.78■□□□□ 0.76
Ccdc60Q8C4J0 Mir5131-201ENSMUST00000175426 93 ntBASIC19.78■□□□□ 0.76
Ccdc60Q8C4J0 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc60Q8C4J0 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Ccdc60Q8C4J0 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Ccdc60Q8C4J0 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
Ccdc60Q8C4J0 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Ccdc60Q8C4J0 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc60Q8C4J0 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc60Q8C4J0 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc60Q8C4J0 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc60Q8C4J0 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC19.78■□□□□ 0.76
Ccdc60Q8C4J0 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc60Q8C4J0 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc60Q8C4J0 Zkscan3-208ENSMUST00000224820 5398 ntBASIC19.78■□□□□ 0.76
Ccdc60Q8C4J0 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc60Q8C4J0 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc60Q8C4J0 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Ccdc60Q8C4J0 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc60Q8C4J0 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Ccdc60Q8C4J0 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
Ccdc60Q8C4J0 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc60Q8C4J0 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Ccdc60Q8C4J0 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc60Q8C4J0 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc60Q8C4J0 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC19.77■□□□□ 0.76
Ccdc60Q8C4J0 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc60Q8C4J0 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc60Q8C4J0 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc60Q8C4J0 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc60Q8C4J0 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc60Q8C4J0 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc60Q8C4J0 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc60Q8C4J0 Gm18195-201ENSMUST00000207604 706 ntBASIC19.77■□□□□ 0.76
Ccdc60Q8C4J0 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc60Q8C4J0 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc60Q8C4J0 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC19.77■□□□□ 0.76
Ccdc60Q8C4J0 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc60Q8C4J0 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc60Q8C4J0 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc60Q8C4J0 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc60Q8C4J0 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc60Q8C4J0 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc60Q8C4J0 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc60Q8C4J0 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc60Q8C4J0 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc60Q8C4J0 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc60Q8C4J0 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC19.77■□□□□ 0.75
Ccdc60Q8C4J0 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Ccdc60Q8C4J0 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
Ccdc60Q8C4J0 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Ccdc60Q8C4J0 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Ccdc60Q8C4J0 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc60Q8C4J0 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc60Q8C4J0 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc60Q8C4J0 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC19.76■□□□□ 0.75
Ccdc60Q8C4J0 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Ccdc60Q8C4J0 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC19.76■□□□□ 0.75
Ccdc60Q8C4J0 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc60Q8C4J0 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC19.76■□□□□ 0.75
Ccdc60Q8C4J0 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc60Q8C4J0 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc60Q8C4J0 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc60Q8C4J0 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc60Q8C4J0 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC19.76■□□□□ 0.75
Ccdc60Q8C4J0 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc60Q8C4J0 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc60Q8C4J0 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc60Q8C4J0 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc60Q8C4J0 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC19.75■□□□□ 0.75
Ccdc60Q8C4J0 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc60Q8C4J0 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc60Q8C4J0 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Ccdc60Q8C4J0 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc60Q8C4J0 Gm27528-202ENSMUST00000222916 2012 ntBASIC19.75■□□□□ 0.75
Ccdc60Q8C4J0 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc60Q8C4J0 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc60Q8C4J0 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc60Q8C4J0 Gm14722-201ENSMUST00000118943 689 ntBASIC19.75■□□□□ 0.75
Ccdc60Q8C4J0 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC19.75■□□□□ 0.75
Ccdc60Q8C4J0 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Ccdc60Q8C4J0 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms