Protein–RNA interactions for Protein: Q8BUP8

Fam43a, Protein FAM43A, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam43aQ8BUP8 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Fam43aQ8BUP8 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Fam43aQ8BUP8 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Fam43aQ8BUP8 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Fam43aQ8BUP8 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Fam43aQ8BUP8 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Fam43aQ8BUP8 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Fam43aQ8BUP8 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Fam43aQ8BUP8 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Fam43aQ8BUP8 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Fam43aQ8BUP8 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Fam43aQ8BUP8 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Fam43aQ8BUP8 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Fam43aQ8BUP8 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Fam43aQ8BUP8 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Fam43aQ8BUP8 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Fam43aQ8BUP8 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Fam43aQ8BUP8 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Fam43aQ8BUP8 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Fam43aQ8BUP8 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Fam43aQ8BUP8 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Fam43aQ8BUP8 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Fam43aQ8BUP8 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Fam43aQ8BUP8 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Fam43aQ8BUP8 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Fam43aQ8BUP8 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Fam43aQ8BUP8 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Fam43aQ8BUP8 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Fam43aQ8BUP8 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Fam43aQ8BUP8 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC17.36■□□□□ 0.37
Fam43aQ8BUP8 Kcnk16-202ENSMUST00000225596 2127 ntBASIC17.36■□□□□ 0.37
Fam43aQ8BUP8 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Fam43aQ8BUP8 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Fam43aQ8BUP8 AC174678.1-201ENSMUST00000228007 2749 ntBASIC17.36■□□□□ 0.37
Fam43aQ8BUP8 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Fam43aQ8BUP8 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Fam43aQ8BUP8 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Fam43aQ8BUP8 CT030684.3-201ENSMUST00000227308 2445 ntBASIC17.36■□□□□ 0.37
Fam43aQ8BUP8 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Fam43aQ8BUP8 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Fam43aQ8BUP8 Mir770-201ENSMUST00000103252 94 ntBASIC17.36■□□□□ 0.37
Fam43aQ8BUP8 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Fam43aQ8BUP8 AA414768-201ENSMUST00000121924 1257 ntBASIC17.36■□□□□ 0.37
Fam43aQ8BUP8 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Fam43aQ8BUP8 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Fam43aQ8BUP8 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Fam43aQ8BUP8 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC17.36■□□□□ 0.37
Fam43aQ8BUP8 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Fam43aQ8BUP8 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Fam43aQ8BUP8 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Fam43aQ8BUP8 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Fam43aQ8BUP8 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Fam43aQ8BUP8 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Fam43aQ8BUP8 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Fam43aQ8BUP8 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Fam43aQ8BUP8 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Fam43aQ8BUP8 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.35■□□□□ 0.37
Fam43aQ8BUP8 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Fam43aQ8BUP8 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Fam43aQ8BUP8 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Fam43aQ8BUP8 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC17.35■□□□□ 0.37
Fam43aQ8BUP8 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Fam43aQ8BUP8 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Fam43aQ8BUP8 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Fam43aQ8BUP8 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Fam43aQ8BUP8 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.35■□□□□ 0.37
Fam43aQ8BUP8 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Fam43aQ8BUP8 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Fam43aQ8BUP8 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.35■□□□□ 0.37
Fam43aQ8BUP8 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.35■□□□□ 0.37
Fam43aQ8BUP8 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Fam43aQ8BUP8 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Fam43aQ8BUP8 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Fam43aQ8BUP8 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Fam43aQ8BUP8 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC17.35■□□□□ 0.37
Fam43aQ8BUP8 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Fam43aQ8BUP8 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Fam43aQ8BUP8 Gm42901-201ENSMUST00000197735 3171 ntBASIC17.35■□□□□ 0.37
Fam43aQ8BUP8 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.35■□□□□ 0.37
Fam43aQ8BUP8 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.35■□□□□ 0.37
Fam43aQ8BUP8 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Fam43aQ8BUP8 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Fam43aQ8BUP8 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Fam43aQ8BUP8 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Fam43aQ8BUP8 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Fam43aQ8BUP8 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Fam43aQ8BUP8 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC17.34■□□□□ 0.37
Fam43aQ8BUP8 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Fam43aQ8BUP8 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Fam43aQ8BUP8 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Fam43aQ8BUP8 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Fam43aQ8BUP8 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.34■□□□□ 0.37
Fam43aQ8BUP8 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Fam43aQ8BUP8 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Fam43aQ8BUP8 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
Fam43aQ8BUP8 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Fam43aQ8BUP8 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Fam43aQ8BUP8 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Fam43aQ8BUP8 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Fam43aQ8BUP8 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms