Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Rd3Q8BRE0 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rd3Q8BRE0 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Rd3Q8BRE0 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.43■□□□□ 0.22
Rd3Q8BRE0 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rd3Q8BRE0 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rd3Q8BRE0 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rd3Q8BRE0 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rd3Q8BRE0 Gm11025-201ENSMUST00000140773 466 ntBASIC16.43■□□□□ 0.22
Rd3Q8BRE0 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC16.43■□□□□ 0.22
Rd3Q8BRE0 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rd3Q8BRE0 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC16.43■□□□□ 0.22
Rd3Q8BRE0 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC16.43■□□□□ 0.22
Rd3Q8BRE0 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.43■□□□□ 0.22
Rd3Q8BRE0 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rd3Q8BRE0 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Rd3Q8BRE0 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rd3Q8BRE0 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rd3Q8BRE0 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rd3Q8BRE0 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rd3Q8BRE0 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.43■□□□□ 0.22
Rd3Q8BRE0 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rd3Q8BRE0 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rd3Q8BRE0 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Rd3Q8BRE0 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rd3Q8BRE0 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rd3Q8BRE0 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rd3Q8BRE0 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rd3Q8BRE0 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Rd3Q8BRE0 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rd3Q8BRE0 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rd3Q8BRE0 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.42■□□□□ 0.22
Rd3Q8BRE0 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rd3Q8BRE0 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rd3Q8BRE0 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.42■□□□□ 0.22
Rd3Q8BRE0 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rd3Q8BRE0 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC16.42■□□□□ 0.22
Rd3Q8BRE0 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rd3Q8BRE0 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC16.42■□□□□ 0.22
Rd3Q8BRE0 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC16.42■□□□□ 0.22
Rd3Q8BRE0 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC16.42■□□□□ 0.22
Rd3Q8BRE0 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Rd3Q8BRE0 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rd3Q8BRE0 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rd3Q8BRE0 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC16.42■□□□□ 0.22
Rd3Q8BRE0 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rd3Q8BRE0 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rd3Q8BRE0 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rd3Q8BRE0 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rd3Q8BRE0 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rd3Q8BRE0 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rd3Q8BRE0 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Rd3Q8BRE0 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rd3Q8BRE0 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rd3Q8BRE0 Gm13294-201ENSMUST00000121757 1330 ntBASIC16.42■□□□□ 0.22
Rd3Q8BRE0 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Rd3Q8BRE0 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rd3Q8BRE0 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Rd3Q8BRE0 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rd3Q8BRE0 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Rd3Q8BRE0 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Rd3Q8BRE0 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rd3Q8BRE0 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rd3Q8BRE0 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rd3Q8BRE0 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rd3Q8BRE0 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.41■□□□□ 0.22
Rd3Q8BRE0 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rd3Q8BRE0 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.41■□□□□ 0.22
Rd3Q8BRE0 Gm45747-201ENSMUST00000212203 999 ntBASIC16.41■□□□□ 0.22
Rd3Q8BRE0 Gm18246-201ENSMUST00000221023 728 ntBASIC16.41■□□□□ 0.22
Rd3Q8BRE0 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rd3Q8BRE0 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rd3Q8BRE0 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Rd3Q8BRE0 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
Rd3Q8BRE0 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rd3Q8BRE0 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC16.41■□□□□ 0.22
Rd3Q8BRE0 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Rd3Q8BRE0 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rd3Q8BRE0 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rd3Q8BRE0 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rd3Q8BRE0 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rd3Q8BRE0 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rd3Q8BRE0 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Rd3Q8BRE0 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rd3Q8BRE0 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rd3Q8BRE0 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rd3Q8BRE0 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Rd3Q8BRE0 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC16.4■□□□□ 0.22
Rd3Q8BRE0 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Rd3Q8BRE0 Auts2-212ENSMUST00000178555 309 ntBASIC16.4■□□□□ 0.22
Rd3Q8BRE0 Gm7286-201ENSMUST00000182691 1007 ntBASIC16.4■□□□□ 0.22
Rd3Q8BRE0 Gm5177-201ENSMUST00000183092 997 ntBASIC16.4■□□□□ 0.22
Rd3Q8BRE0 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rd3Q8BRE0 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC16.4■□□□□ 0.22
Rd3Q8BRE0 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC16.4■□□□□ 0.22
Rd3Q8BRE0 AC155252.2-201ENSMUST00000226946 680 ntBASIC16.4■□□□□ 0.22
Rd3Q8BRE0 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rd3Q8BRE0 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rd3Q8BRE0 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rd3Q8BRE0 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms