Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf38Q8BI21 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf38Q8BI21 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf38Q8BI21 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf38Q8BI21 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf38Q8BI21 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf38Q8BI21 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
Rnf38Q8BI21 Gm8784-201ENSMUST00000222096 1435 ntBASIC15□□□□□ -0.01
Rnf38Q8BI21 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Rnf38Q8BI21 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rnf38Q8BI21 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rnf38Q8BI21 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rnf38Q8BI21 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rnf38Q8BI21 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rnf38Q8BI21 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rnf38Q8BI21 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Rnf38Q8BI21 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Rnf38Q8BI21 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rnf38Q8BI21 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rnf38Q8BI21 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Rnf38Q8BI21 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rnf38Q8BI21 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rnf38Q8BI21 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC15□□□□□ -0.01
Rnf38Q8BI21 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15□□□□□ -0.01
Rnf38Q8BI21 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Rnf38Q8BI21 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rnf38Q8BI21 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rnf38Q8BI21 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rnf38Q8BI21 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rnf38Q8BI21 Grk6-207ENSMUST00000225925 2769 ntBASIC15□□□□□ -0.01
Rnf38Q8BI21 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Rnf38Q8BI21 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rnf38Q8BI21 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Rnf38Q8BI21 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rnf38Q8BI21 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rnf38Q8BI21 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Rnf38Q8BI21 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rnf38Q8BI21 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rnf38Q8BI21 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf38Q8BI21 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
Rnf38Q8BI21 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf38Q8BI21 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf38Q8BI21 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf38Q8BI21 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf38Q8BI21 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf38Q8BI21 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Rnf38Q8BI21 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf38Q8BI21 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf38Q8BI21 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
Rnf38Q8BI21 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf38Q8BI21 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf38Q8BI21 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Rnf38Q8BI21 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf38Q8BI21 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf38Q8BI21 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf38Q8BI21 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf38Q8BI21 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.99□□□□□ -0.01
Rnf38Q8BI21 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf38Q8BI21 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Rnf38Q8BI21 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf38Q8BI21 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf38Q8BI21 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Rnf38Q8BI21 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Rnf38Q8BI21 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf38Q8BI21 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf38Q8BI21 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.99□□□□□ -0.01
Rnf38Q8BI21 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Rnf38Q8BI21 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf38Q8BI21 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf38Q8BI21 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf38Q8BI21 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf38Q8BI21 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf38Q8BI21 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf38Q8BI21 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
Rnf38Q8BI21 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Rnf38Q8BI21 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf38Q8BI21 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf38Q8BI21 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.98□□□□□ -0.01
Rnf38Q8BI21 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf38Q8BI21 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.98□□□□□ -0.01
Rnf38Q8BI21 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Rnf38Q8BI21 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf38Q8BI21 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf38Q8BI21 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf38Q8BI21 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf38Q8BI21 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf38Q8BI21 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf38Q8BI21 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf38Q8BI21 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.98□□□□□ -0.01
Rnf38Q8BI21 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf38Q8BI21 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf38Q8BI21 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Rnf38Q8BI21 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.98□□□□□ -0.01
Rnf38Q8BI21 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
Rnf38Q8BI21 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Rnf38Q8BI21 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf38Q8BI21 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf38Q8BI21 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf38Q8BI21 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf38Q8BI21 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms