Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc5a7Q8BGY9 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC13.64□□□□□ -0.23
Slc5a7Q8BGY9 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Slc5a7Q8BGY9 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Slc5a7Q8BGY9 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Slc5a7Q8BGY9 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc5a7Q8BGY9 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc5a7Q8BGY9 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.64□□□□□ -0.23
Slc5a7Q8BGY9 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Slc5a7Q8BGY9 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Slc5a7Q8BGY9 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Slc5a7Q8BGY9 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Slc5a7Q8BGY9 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Slc5a7Q8BGY9 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Slc5a7Q8BGY9 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Slc5a7Q8BGY9 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Slc5a7Q8BGY9 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.63□□□□□ -0.23
Slc5a7Q8BGY9 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC13.63□□□□□ -0.23
Slc5a7Q8BGY9 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Slc5a7Q8BGY9 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Slc5a7Q8BGY9 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC13.63□□□□□ -0.23
Slc5a7Q8BGY9 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Slc5a7Q8BGY9 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Slc5a7Q8BGY9 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Slc5a7Q8BGY9 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Slc5a7Q8BGY9 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Slc5a7Q8BGY9 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
Slc5a7Q8BGY9 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Slc5a7Q8BGY9 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Slc5a7Q8BGY9 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Slc5a7Q8BGY9 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Slc5a7Q8BGY9 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Slc5a7Q8BGY9 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Slc5a7Q8BGY9 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Slc5a7Q8BGY9 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc5a7Q8BGY9 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc5a7Q8BGY9 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc5a7Q8BGY9 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Slc5a7Q8BGY9 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc5a7Q8BGY9 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc5a7Q8BGY9 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Slc5a7Q8BGY9 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc5a7Q8BGY9 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc5a7Q8BGY9 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc5a7Q8BGY9 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc5a7Q8BGY9 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc5a7Q8BGY9 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc5a7Q8BGY9 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc5a7Q8BGY9 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc5a7Q8BGY9 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc5a7Q8BGY9 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC13.62□□□□□ -0.23
Slc5a7Q8BGY9 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc5a7Q8BGY9 Gm4217-201ENSMUST00000182243 1002 ntBASIC13.62□□□□□ -0.23
Slc5a7Q8BGY9 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Slc5a7Q8BGY9 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc5a7Q8BGY9 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc5a7Q8BGY9 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Slc5a7Q8BGY9 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc5a7Q8BGY9 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Slc5a7Q8BGY9 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc5a7Q8BGY9 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Slc5a7Q8BGY9 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
Slc5a7Q8BGY9 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Slc5a7Q8BGY9 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.62□□□□□ -0.23
Slc5a7Q8BGY9 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc5a7Q8BGY9 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Slc5a7Q8BGY9 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC13.61□□□□□ -0.23
Slc5a7Q8BGY9 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc5a7Q8BGY9 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Slc5a7Q8BGY9 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.61□□□□□ -0.23
Slc5a7Q8BGY9 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Slc5a7Q8BGY9 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc5a7Q8BGY9 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc5a7Q8BGY9 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Slc5a7Q8BGY9 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc5a7Q8BGY9 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc5a7Q8BGY9 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc5a7Q8BGY9 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC13.61□□□□□ -0.23
Slc5a7Q8BGY9 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
Slc5a7Q8BGY9 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Slc5a7Q8BGY9 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Slc5a7Q8BGY9 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc5a7Q8BGY9 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.61□□□□□ -0.23
Slc5a7Q8BGY9 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc5a7Q8BGY9 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc5a7Q8BGY9 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc5a7Q8BGY9 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc5a7Q8BGY9 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.61□□□□□ -0.23
Slc5a7Q8BGY9 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC13.61□□□□□ -0.23
Slc5a7Q8BGY9 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC13.61□□□□□ -0.23
Slc5a7Q8BGY9 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Slc5a7Q8BGY9 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc5a7Q8BGY9 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc5a7Q8BGY9 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
Slc5a7Q8BGY9 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc5a7Q8BGY9 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc5a7Q8BGY9 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.61□□□□□ -0.23
Slc5a7Q8BGY9 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc5a7Q8BGY9 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc5a7Q8BGY9 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms