Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smndc1Q8BGT7 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Smndc1Q8BGT7 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smndc1Q8BGT7 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smndc1Q8BGT7 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smndc1Q8BGT7 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.13■□□□□ 0.01
Smndc1Q8BGT7 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smndc1Q8BGT7 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smndc1Q8BGT7 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smndc1Q8BGT7 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Smndc1Q8BGT7 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smndc1Q8BGT7 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Smndc1Q8BGT7 Gm13474-201ENSMUST00000122466 815 ntBASIC15.13■□□□□ 0.01
Smndc1Q8BGT7 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC15.13■□□□□ 0.01
Smndc1Q8BGT7 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Smndc1Q8BGT7 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC15.13■□□□□ 0.01
Smndc1Q8BGT7 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Smndc1Q8BGT7 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Smndc1Q8BGT7 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC15.13■□□□□ 0.01
Smndc1Q8BGT7 AC134329.2-201ENSMUST00000217897 428 ntBASIC15.13■□□□□ 0.01
Smndc1Q8BGT7 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Smndc1Q8BGT7 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC15.13■□□□□ 0.01
Smndc1Q8BGT7 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Smndc1Q8BGT7 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Smndc1Q8BGT7 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Smndc1Q8BGT7 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC15.13■□□□□ 0.01
Smndc1Q8BGT7 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smndc1Q8BGT7 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Smndc1Q8BGT7 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Smndc1Q8BGT7 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smndc1Q8BGT7 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Smndc1Q8BGT7 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smndc1Q8BGT7 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Smndc1Q8BGT7 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smndc1Q8BGT7 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Smndc1Q8BGT7 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smndc1Q8BGT7 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smndc1Q8BGT7 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smndc1Q8BGT7 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
Smndc1Q8BGT7 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC15.12■□□□□ 0.01
Smndc1Q8BGT7 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Smndc1Q8BGT7 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smndc1Q8BGT7 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC15.12■□□□□ 0.01
Smndc1Q8BGT7 Gm23634-201ENSMUST00000175071 91 ntBASIC15.12■□□□□ 0.01
Smndc1Q8BGT7 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Smndc1Q8BGT7 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Smndc1Q8BGT7 Gm18032-201ENSMUST00000222541 538 ntBASIC15.12■□□□□ 0.01
Smndc1Q8BGT7 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC15.12■□□□□ 0.01
Smndc1Q8BGT7 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Smndc1Q8BGT7 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smndc1Q8BGT7 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smndc1Q8BGT7 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smndc1Q8BGT7 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smndc1Q8BGT7 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smndc1Q8BGT7 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smndc1Q8BGT7 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Smndc1Q8BGT7 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smndc1Q8BGT7 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Smndc1Q8BGT7 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smndc1Q8BGT7 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smndc1Q8BGT7 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Smndc1Q8BGT7 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smndc1Q8BGT7 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smndc1Q8BGT7 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smndc1Q8BGT7 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Smndc1Q8BGT7 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smndc1Q8BGT7 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smndc1Q8BGT7 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Smndc1Q8BGT7 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smndc1Q8BGT7 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smndc1Q8BGT7 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smndc1Q8BGT7 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Smndc1Q8BGT7 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smndc1Q8BGT7 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smndc1Q8BGT7 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smndc1Q8BGT7 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smndc1Q8BGT7 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smndc1Q8BGT7 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smndc1Q8BGT7 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smndc1Q8BGT7 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smndc1Q8BGT7 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Smndc1Q8BGT7 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smndc1Q8BGT7 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smndc1Q8BGT7 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smndc1Q8BGT7 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Smndc1Q8BGT7 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smndc1Q8BGT7 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smndc1Q8BGT7 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
Smndc1Q8BGT7 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Smndc1Q8BGT7 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smndc1Q8BGT7 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smndc1Q8BGT7 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smndc1Q8BGT7 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smndc1Q8BGT7 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Smndc1Q8BGT7 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smndc1Q8BGT7 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smndc1Q8BGT7 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smndc1Q8BGT7 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smndc1Q8BGT7 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Smndc1Q8BGT7 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms