Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Gm7889-201ENSMUST00000185591 958 ntBASIC16.54■□□□□ 0.24
Trim6Q8BGE7 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim6Q8BGE7 Gm9889-202ENSMUST00000206983 1577 ntBASIC16.54■□□□□ 0.24
Trim6Q8BGE7 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim6Q8BGE7 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
Trim6Q8BGE7 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim6Q8BGE7 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim6Q8BGE7 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim6Q8BGE7 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim6Q8BGE7 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim6Q8BGE7 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim6Q8BGE7 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC16.54■□□□□ 0.24
Trim6Q8BGE7 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim6Q8BGE7 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim6Q8BGE7 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim6Q8BGE7 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Trim6Q8BGE7 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC16.53■□□□□ 0.24
Trim6Q8BGE7 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim6Q8BGE7 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim6Q8BGE7 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC16.53■□□□□ 0.24
Trim6Q8BGE7 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.53■□□□□ 0.24
Trim6Q8BGE7 Gm37722-201ENSMUST00000193757 208 ntBASIC16.53■□□□□ 0.24
Trim6Q8BGE7 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.53■□□□□ 0.24
Trim6Q8BGE7 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim6Q8BGE7 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim6Q8BGE7 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Trim6Q8BGE7 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim6Q8BGE7 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim6Q8BGE7 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.53■□□□□ 0.24
Trim6Q8BGE7 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Trim6Q8BGE7 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim6Q8BGE7 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim6Q8BGE7 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trim6Q8BGE7 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.53■□□□□ 0.24
Trim6Q8BGE7 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim6Q8BGE7 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim6Q8BGE7 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim6Q8BGE7 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim6Q8BGE7 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
Trim6Q8BGE7 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim6Q8BGE7 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim6Q8BGE7 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Trim6Q8BGE7 Gm13034-201ENSMUST00000121342 3177 ntBASIC16.52■□□□□ 0.24
Trim6Q8BGE7 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Trim6Q8BGE7 Gm44430-201ENSMUST00000203376 995 ntBASIC16.52■□□□□ 0.24
Trim6Q8BGE7 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Trim6Q8BGE7 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim6Q8BGE7 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim6Q8BGE7 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim6Q8BGE7 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim6Q8BGE7 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim6Q8BGE7 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim6Q8BGE7 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim6Q8BGE7 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC16.52■□□□□ 0.23
Trim6Q8BGE7 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim6Q8BGE7 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Trim6Q8BGE7 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Trim6Q8BGE7 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim6Q8BGE7 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.23
Trim6Q8BGE7 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim6Q8BGE7 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trim6Q8BGE7 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim6Q8BGE7 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim6Q8BGE7 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim6Q8BGE7 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim6Q8BGE7 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trim6Q8BGE7 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Trim6Q8BGE7 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.51■□□□□ 0.23
Trim6Q8BGE7 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
Trim6Q8BGE7 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim6Q8BGE7 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trim6Q8BGE7 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Trim6Q8BGE7 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trim6Q8BGE7 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
Trim6Q8BGE7 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Trim6Q8BGE7 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Trim6Q8BGE7 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Trim6Q8BGE7 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Trim6Q8BGE7 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.51■□□□□ 0.23
Trim6Q8BGE7 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim6Q8BGE7 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.51■□□□□ 0.23
Trim6Q8BGE7 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim6Q8BGE7 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim6Q8BGE7 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim6Q8BGE7 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim6Q8BGE7 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim6Q8BGE7 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim6Q8BGE7 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim6Q8BGE7 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Trim6Q8BGE7 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim6Q8BGE7 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trim6Q8BGE7 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim6Q8BGE7 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trim6Q8BGE7 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
Trim6Q8BGE7 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim6Q8BGE7 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim6Q8BGE7 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim6Q8BGE7 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trim6Q8BGE7 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.5■□□□□ 0.23
Trim6Q8BGE7 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms