Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC17.88■□□□□ 0.45
Prpf40bQ80W14 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Prpf40bQ80W14 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
Prpf40bQ80W14 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Prpf40bQ80W14 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Prpf40bQ80W14 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
Prpf40bQ80W14 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Prpf40bQ80W14 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Prpf40bQ80W14 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Prpf40bQ80W14 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Prpf40bQ80W14 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Prpf40bQ80W14 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Prpf40bQ80W14 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Prpf40bQ80W14 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.88■□□□□ 0.45
Prpf40bQ80W14 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Prpf40bQ80W14 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Prpf40bQ80W14 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Prpf40bQ80W14 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Prpf40bQ80W14 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Prpf40bQ80W14 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Prpf40bQ80W14 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Prpf40bQ80W14 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Prpf40bQ80W14 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Prpf40bQ80W14 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Prpf40bQ80W14 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Prpf40bQ80W14 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Prpf40bQ80W14 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Prpf40bQ80W14 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Prpf40bQ80W14 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Prpf40bQ80W14 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Prpf40bQ80W14 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
Prpf40bQ80W14 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC17.87■□□□□ 0.45
Prpf40bQ80W14 Gm27646-201ENSMUST00000183989 110 ntBASIC17.87■□□□□ 0.45
Prpf40bQ80W14 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC17.87■□□□□ 0.45
Prpf40bQ80W14 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Prpf40bQ80W14 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Prpf40bQ80W14 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Prpf40bQ80W14 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Prpf40bQ80W14 Zkscan3-208ENSMUST00000224820 5398 ntBASIC17.87■□□□□ 0.45
Prpf40bQ80W14 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Prpf40bQ80W14 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC17.87■□□□□ 0.45
Prpf40bQ80W14 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Prpf40bQ80W14 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Prpf40bQ80W14 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Prpf40bQ80W14 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Prpf40bQ80W14 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Prpf40bQ80W14 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Prpf40bQ80W14 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
Prpf40bQ80W14 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Prpf40bQ80W14 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Prpf40bQ80W14 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Prpf40bQ80W14 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC17.86■□□□□ 0.45
Prpf40bQ80W14 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
Prpf40bQ80W14 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Prpf40bQ80W14 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Prpf40bQ80W14 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Prpf40bQ80W14 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC17.86■□□□□ 0.45
Prpf40bQ80W14 Gm25406-201ENSMUST00000157599 105 ntBASIC17.86■□□□□ 0.45
Prpf40bQ80W14 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Prpf40bQ80W14 Gm5745-201ENSMUST00000183748 313 ntBASIC17.86■□□□□ 0.45
Prpf40bQ80W14 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC17.86■□□□□ 0.45
Prpf40bQ80W14 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Prpf40bQ80W14 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Prpf40bQ80W14 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Prpf40bQ80W14 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Prpf40bQ80W14 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Prpf40bQ80W14 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Prpf40bQ80W14 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Prpf40bQ80W14 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Prpf40bQ80W14 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Prpf40bQ80W14 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Prpf40bQ80W14 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Prpf40bQ80W14 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Prpf40bQ80W14 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Prpf40bQ80W14 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Prpf40bQ80W14 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Prpf40bQ80W14 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Prpf40bQ80W14 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Prpf40bQ80W14 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC17.85■□□□□ 0.45
Prpf40bQ80W14 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC17.85■□□□□ 0.45
Prpf40bQ80W14 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC17.85■□□□□ 0.45
Prpf40bQ80W14 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC17.85■□□□□ 0.45
Prpf40bQ80W14 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Prpf40bQ80W14 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Prpf40bQ80W14 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Prpf40bQ80W14 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Prpf40bQ80W14 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Prpf40bQ80W14 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Prpf40bQ80W14 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Prpf40bQ80W14 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Prpf40bQ80W14 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Prpf40bQ80W14 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Prpf40bQ80W14 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Prpf40bQ80W14 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prpf40bQ80W14 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prpf40bQ80W14 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prpf40bQ80W14 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Prpf40bQ80W14 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Prpf40bQ80W14 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prpf40bQ80W14 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms