Protein–RNA interactions for Protein: Q6PE54

Dhx40, Probable ATP-dependent RNA helicase DHX40, mousemouse

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dhx40Q6PE54 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
Dhx40Q6PE54 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Dhx40Q6PE54 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.27■□□□□ 0.36
Dhx40Q6PE54 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Dhx40Q6PE54 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Dhx40Q6PE54 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Dhx40Q6PE54 Zkscan3-208ENSMUST00000224820 5398 ntBASIC17.27■□□□□ 0.35
Dhx40Q6PE54 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Dhx40Q6PE54 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Dhx40Q6PE54 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Dhx40Q6PE54 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Dhx40Q6PE54 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Dhx40Q6PE54 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Dhx40Q6PE54 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Dhx40Q6PE54 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Dhx40Q6PE54 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Dhx40Q6PE54 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Dhx40Q6PE54 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Dhx40Q6PE54 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Dhx40Q6PE54 Gm8349-201ENSMUST00000182720 1003 ntBASIC17.26■□□□□ 0.35
Dhx40Q6PE54 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Dhx40Q6PE54 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Dhx40Q6PE54 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Dhx40Q6PE54 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Dhx40Q6PE54 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Dhx40Q6PE54 Gm5049-201ENSMUST00000195878 1590 ntBASIC17.26■□□□□ 0.35
Dhx40Q6PE54 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Dhx40Q6PE54 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Dhx40Q6PE54 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC17.26■□□□□ 0.35
Dhx40Q6PE54 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Dhx40Q6PE54 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Dhx40Q6PE54 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Dhx40Q6PE54 Sybu-209ENSMUST00000228639 4113 ntBASIC17.26■□□□□ 0.35
Dhx40Q6PE54 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Dhx40Q6PE54 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Dhx40Q6PE54 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Dhx40Q6PE54 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC17.25■□□□□ 0.35
Dhx40Q6PE54 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Dhx40Q6PE54 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Dhx40Q6PE54 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Dhx40Q6PE54 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Dhx40Q6PE54 Camk2g-217ENSMUST00000226630 1937 ntBASIC17.25■□□□□ 0.35
Dhx40Q6PE54 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Dhx40Q6PE54 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Dhx40Q6PE54 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Dhx40Q6PE54 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Dhx40Q6PE54 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Dhx40Q6PE54 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Dhx40Q6PE54 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Dhx40Q6PE54 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Dhx40Q6PE54 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Dhx40Q6PE54 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Dhx40Q6PE54 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Dhx40Q6PE54 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Dhx40Q6PE54 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Dhx40Q6PE54 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Dhx40Q6PE54 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Dhx40Q6PE54 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Dhx40Q6PE54 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Dhx40Q6PE54 Gm37912-201ENSMUST00000191895 3076 ntBASIC17.25■□□□□ 0.35
Dhx40Q6PE54 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Dhx40Q6PE54 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Dhx40Q6PE54 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Dhx40Q6PE54 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Dhx40Q6PE54 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Dhx40Q6PE54 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Dhx40Q6PE54 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Dhx40Q6PE54 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Dhx40Q6PE54 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Dhx40Q6PE54 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Dhx40Q6PE54 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Dhx40Q6PE54 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Dhx40Q6PE54 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Dhx40Q6PE54 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.24■□□□□ 0.35
Dhx40Q6PE54 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Dhx40Q6PE54 Gm21362-201ENSMUST00000194272 928 ntBASIC17.24■□□□□ 0.35
Dhx40Q6PE54 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.24■□□□□ 0.35
Dhx40Q6PE54 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Dhx40Q6PE54 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Dhx40Q6PE54 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Dhx40Q6PE54 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Dhx40Q6PE54 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Dhx40Q6PE54 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Dhx40Q6PE54 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Dhx40Q6PE54 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Dhx40Q6PE54 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Dhx40Q6PE54 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Dhx40Q6PE54 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Dhx40Q6PE54 Gm10605-202ENSMUST00000183019 3198 ntBASIC17.23■□□□□ 0.35
Dhx40Q6PE54 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC17.23■□□□□ 0.35
Dhx40Q6PE54 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Dhx40Q6PE54 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Dhx40Q6PE54 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Dhx40Q6PE54 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC17.23■□□□□ 0.35
Dhx40Q6PE54 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Dhx40Q6PE54 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.23■□□□□ 0.35
Dhx40Q6PE54 Gm6345-202ENSMUST00000180900 204 ntBASIC17.23■□□□□ 0.35
Dhx40Q6PE54 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Dhx40Q6PE54 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Dhx40Q6PE54 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms