Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Clcn1Q64347 AA543401-201ENSMUST00000164248 1269 ntBASIC19.6■□□□□ 0.73
Clcn1Q64347 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Clcn1Q64347 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC19.6■□□□□ 0.73
Clcn1Q64347 Gm18246-201ENSMUST00000221023 728 ntBASIC19.6■□□□□ 0.73
Clcn1Q64347 AC158538.2-201ENSMUST00000225455 906 ntBASIC19.6■□□□□ 0.73
Clcn1Q64347 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clcn1Q64347 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clcn1Q64347 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clcn1Q64347 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clcn1Q64347 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Clcn1Q64347 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clcn1Q64347 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clcn1Q64347 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clcn1Q64347 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clcn1Q64347 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC19.6■□□□□ 0.73
Clcn1Q64347 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC19.59■□□□□ 0.73
Clcn1Q64347 Gm5184-201ENSMUST00000220417 1702 ntBASIC19.59■□□□□ 0.73
Clcn1Q64347 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clcn1Q64347 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Clcn1Q64347 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clcn1Q64347 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clcn1Q64347 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clcn1Q64347 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC19.59■□□□□ 0.73
Clcn1Q64347 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Clcn1Q64347 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Clcn1Q64347 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clcn1Q64347 Gm45612-201ENSMUST00000211320 160 ntBASIC19.59■□□□□ 0.73
Clcn1Q64347 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC19.59■□□□□ 0.73
Clcn1Q64347 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Clcn1Q64347 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC19.59■□□□□ 0.73
Clcn1Q64347 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clcn1Q64347 Nrn1-204ENSMUST00000224323 1779 ntBASIC19.58■□□□□ 0.73
Clcn1Q64347 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC19.58■□□□□ 0.73
Clcn1Q64347 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Clcn1Q64347 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
Clcn1Q64347 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC19.58■□□□□ 0.73
Clcn1Q64347 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Clcn1Q64347 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
Clcn1Q64347 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Clcn1Q64347 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Clcn1Q64347 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Clcn1Q64347 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Clcn1Q64347 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Clcn1Q64347 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Clcn1Q64347 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clcn1Q64347 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clcn1Q64347 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clcn1Q64347 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Clcn1Q64347 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clcn1Q64347 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clcn1Q64347 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC19.57■□□□□ 0.72
Clcn1Q64347 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Clcn1Q64347 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Clcn1Q64347 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Clcn1Q64347 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC19.57■□□□□ 0.72
Clcn1Q64347 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC19.57■□□□□ 0.72
Clcn1Q64347 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Clcn1Q64347 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Clcn1Q64347 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Clcn1Q64347 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC19.57■□□□□ 0.72
Clcn1Q64347 Gm27301-201ENSMUST00000184012 127 ntBASIC19.57■□□□□ 0.72
Clcn1Q64347 Gm27321-201ENSMUST00000185021 205 ntBASIC19.57■□□□□ 0.72
Clcn1Q64347 Gm5312-201ENSMUST00000203728 547 ntBASIC19.57■□□□□ 0.72
Clcn1Q64347 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC19.57■□□□□ 0.72
Clcn1Q64347 Gm20949-201ENSMUST00000206478 952 ntBASIC19.57■□□□□ 0.72
Clcn1Q64347 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clcn1Q64347 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Clcn1Q64347 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Clcn1Q64347 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clcn1Q64347 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.57■□□□□ 0.72
Clcn1Q64347 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clcn1Q64347 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clcn1Q64347 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clcn1Q64347 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clcn1Q64347 Gm19430-201ENSMUST00000193847 2137 ntBASIC19.57■□□□□ 0.72
Clcn1Q64347 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clcn1Q64347 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Clcn1Q64347 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Clcn1Q64347 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Clcn1Q64347 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Clcn1Q64347 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Clcn1Q64347 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Clcn1Q64347 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Clcn1Q64347 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Clcn1Q64347 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Clcn1Q64347 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Clcn1Q64347 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Clcn1Q64347 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
Clcn1Q64347 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Clcn1Q64347 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Clcn1Q64347 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Clcn1Q64347 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
Clcn1Q64347 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Clcn1Q64347 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clcn1Q64347 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clcn1Q64347 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clcn1Q64347 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Clcn1Q64347 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clcn1Q64347 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms