Protein–RNA interactions for Protein: Q62425

Ndufa4, Cytochrome c oxidase subunit NDUFA4, mousemouse

Known RBP Predictions only

Length 82 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa4Q62425 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Ndufa4Q62425 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ndufa4Q62425 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC11.28□□□□□ -0.6
Ndufa4Q62425 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ndufa4Q62425 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ndufa4Q62425 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Ndufa4Q62425 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ndufa4Q62425 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ndufa4Q62425 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC11.28□□□□□ -0.6
Ndufa4Q62425 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ndufa4Q62425 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ndufa4Q62425 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ndufa4Q62425 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ndufa4Q62425 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ndufa4Q62425 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ndufa4Q62425 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Ndufa4Q62425 Gm8784-201ENSMUST00000222096 1435 ntBASIC11.27□□□□□ -0.6
Ndufa4Q62425 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ndufa4Q62425 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ndufa4Q62425 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ndufa4Q62425 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ndufa4Q62425 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ndufa4Q62425 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ndufa4Q62425 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ndufa4Q62425 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ndufa4Q62425 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC11.27□□□□□ -0.61
Ndufa4Q62425 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ndufa4Q62425 Gm6257-201ENSMUST00000163864 910 ntBASIC11.27□□□□□ -0.61
Ndufa4Q62425 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC11.27□□□□□ -0.61
Ndufa4Q62425 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ndufa4Q62425 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Ndufa4Q62425 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC11.27□□□□□ -0.61
Ndufa4Q62425 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC11.27□□□□□ -0.61
Ndufa4Q62425 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC11.27□□□□□ -0.61
Ndufa4Q62425 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ndufa4Q62425 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ndufa4Q62425 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ndufa4Q62425 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Ndufa4Q62425 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Ndufa4Q62425 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ndufa4Q62425 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ndufa4Q62425 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ndufa4Q62425 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ndufa4Q62425 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ndufa4Q62425 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC11.27□□□□□ -0.61
Ndufa4Q62425 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ndufa4Q62425 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC11.27□□□□□ -0.61
Ndufa4Q62425 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ndufa4Q62425 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC11.27□□□□□ -0.61
Ndufa4Q62425 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ndufa4Q62425 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ndufa4Q62425 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ndufa4Q62425 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ndufa4Q62425 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Ndufa4Q62425 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ndufa4Q62425 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ndufa4Q62425 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC11.26□□□□□ -0.61
Ndufa4Q62425 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ndufa4Q62425 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ndufa4Q62425 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ndufa4Q62425 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ndufa4Q62425 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ndufa4Q62425 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ndufa4Q62425 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ndufa4Q62425 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ndufa4Q62425 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ndufa4Q62425 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ndufa4Q62425 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC11.26□□□□□ -0.61
Ndufa4Q62425 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ndufa4Q62425 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ndufa4Q62425 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ndufa4Q62425 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ndufa4Q62425 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ndufa4Q62425 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ndufa4Q62425 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ndufa4Q62425 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC11.26□□□□□ -0.61
Ndufa4Q62425 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ndufa4Q62425 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ndufa4Q62425 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ndufa4Q62425 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Ndufa4Q62425 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ndufa4Q62425 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ndufa4Q62425 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ndufa4Q62425 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ndufa4Q62425 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC11.26□□□□□ -0.61
Ndufa4Q62425 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ndufa4Q62425 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC11.26□□□□□ -0.61
Ndufa4Q62425 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC11.25□□□□□ -0.61
Ndufa4Q62425 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ndufa4Q62425 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC11.25□□□□□ -0.61
Ndufa4Q62425 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ndufa4Q62425 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ndufa4Q62425 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ndufa4Q62425 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ndufa4Q62425 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Ndufa4Q62425 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ndufa4Q62425 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Ndufa4Q62425 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ndufa4Q62425 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ndufa4Q62425 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms