Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scn9aQ62205 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Scn9aQ62205 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Scn9aQ62205 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Scn9aQ62205 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scn9aQ62205 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Scn9aQ62205 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scn9aQ62205 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scn9aQ62205 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scn9aQ62205 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC18.09■□□□□ 0.49
Scn9aQ62205 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC18.09■□□□□ 0.49
Scn9aQ62205 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Scn9aQ62205 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Scn9aQ62205 Syt7-204ENSMUST00000223586 1344 ntBASIC18.09■□□□□ 0.49
Scn9aQ62205 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC18.09■□□□□ 0.49
Scn9aQ62205 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Scn9aQ62205 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC18.09■□□□□ 0.49
Scn9aQ62205 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Scn9aQ62205 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scn9aQ62205 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scn9aQ62205 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Scn9aQ62205 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scn9aQ62205 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scn9aQ62205 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scn9aQ62205 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Scn9aQ62205 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Scn9aQ62205 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Scn9aQ62205 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Scn9aQ62205 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Scn9aQ62205 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Scn9aQ62205 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC18.08■□□□□ 0.49
Scn9aQ62205 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC18.08■□□□□ 0.49
Scn9aQ62205 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Scn9aQ62205 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Scn9aQ62205 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Scn9aQ62205 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Scn9aQ62205 Ntrk2-205ENSMUST00000224402 2284 ntBASIC18.08■□□□□ 0.48
Scn9aQ62205 Gm8096-201ENSMUST00000209921 1591 ntBASIC18.08■□□□□ 0.48
Scn9aQ62205 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC18.08■□□□□ 0.48
Scn9aQ62205 AL593843.1-201ENSMUST00000195891 145 ntBASIC18.08■□□□□ 0.48
Scn9aQ62205 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC18.08■□□□□ 0.48
Scn9aQ62205 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC18.08■□□□□ 0.48
Scn9aQ62205 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Scn9aQ62205 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Scn9aQ62205 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Scn9aQ62205 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Scn9aQ62205 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Scn9aQ62205 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scn9aQ62205 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Scn9aQ62205 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scn9aQ62205 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC18.07■□□□□ 0.48
Scn9aQ62205 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scn9aQ62205 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Scn9aQ62205 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scn9aQ62205 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scn9aQ62205 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scn9aQ62205 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scn9aQ62205 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC18.07■□□□□ 0.48
Scn9aQ62205 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC18.07■□□□□ 0.48
Scn9aQ62205 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scn9aQ62205 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scn9aQ62205 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scn9aQ62205 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scn9aQ62205 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scn9aQ62205 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Scn9aQ62205 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC18.07■□□□□ 0.48
Scn9aQ62205 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scn9aQ62205 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Scn9aQ62205 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.06■□□□□ 0.48
Scn9aQ62205 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scn9aQ62205 Gm14928-201ENSMUST00000120198 477 ntBASIC18.06■□□□□ 0.48
Scn9aQ62205 Gm15321-201ENSMUST00000121290 288 ntBASIC18.06■□□□□ 0.48
Scn9aQ62205 Gm18766-201ENSMUST00000189811 808 ntBASIC18.06■□□□□ 0.48
Scn9aQ62205 Gm44344-201ENSMUST00000200287 129 ntBASIC18.06■□□□□ 0.48
Scn9aQ62205 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scn9aQ62205 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scn9aQ62205 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scn9aQ62205 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scn9aQ62205 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scn9aQ62205 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Scn9aQ62205 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Scn9aQ62205 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scn9aQ62205 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scn9aQ62205 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scn9aQ62205 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scn9aQ62205 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scn9aQ62205 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scn9aQ62205 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC18.06■□□□□ 0.48
Scn9aQ62205 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC18.06■□□□□ 0.48
Scn9aQ62205 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Scn9aQ62205 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Scn9aQ62205 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC18.05■□□□□ 0.48
Scn9aQ62205 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Scn9aQ62205 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scn9aQ62205 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scn9aQ62205 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scn9aQ62205 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Scn9aQ62205 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.05■□□□□ 0.48
Scn9aQ62205 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scn9aQ62205 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms