Protein–RNA interactions for Protein: Q61457

Ccne1, G1/S-specific cyclin-E1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccne1Q61457 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccne1Q61457 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccne1Q61457 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccne1Q61457 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Ccne1Q61457 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ccne1Q61457 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ccne1Q61457 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC20.12■□□□□ 0.81
Ccne1Q61457 Gm2272-201ENSMUST00000194903 582 ntBASIC20.12■□□□□ 0.81
Ccne1Q61457 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccne1Q61457 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC20.12■□□□□ 0.81
Ccne1Q61457 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccne1Q61457 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC20.12■□□□□ 0.81
Ccne1Q61457 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccne1Q61457 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccne1Q61457 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccne1Q61457 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccne1Q61457 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccne1Q61457 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccne1Q61457 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccne1Q61457 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ccne1Q61457 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Ccne1Q61457 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ccne1Q61457 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ccne1Q61457 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
Ccne1Q61457 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ccne1Q61457 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ccne1Q61457 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ccne1Q61457 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ccne1Q61457 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ccne1Q61457 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
Ccne1Q61457 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ccne1Q61457 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Ccne1Q61457 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC20.11■□□□□ 0.81
Ccne1Q61457 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Ccne1Q61457 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC20.11■□□□□ 0.81
Ccne1Q61457 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Ccne1Q61457 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC20.11■□□□□ 0.81
Ccne1Q61457 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC20.11■□□□□ 0.81
Ccne1Q61457 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC20.11■□□□□ 0.81
Ccne1Q61457 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ccne1Q61457 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC20.11■□□□□ 0.81
Ccne1Q61457 Gm10154-201ENSMUST00000084445 354 ntBASIC20.11■□□□□ 0.81
Ccne1Q61457 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Ccne1Q61457 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC20.11■□□□□ 0.81
Ccne1Q61457 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Ccne1Q61457 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
Ccne1Q61457 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ccne1Q61457 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ccne1Q61457 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC20.1■□□□□ 0.81
Ccne1Q61457 Gm6018-201ENSMUST00000216090 1306 ntBASIC20.1■□□□□ 0.81
Ccne1Q61457 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ccne1Q61457 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC20.1■□□□□ 0.81
Ccne1Q61457 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC20.1■□□□□ 0.81
Ccne1Q61457 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ccne1Q61457 Gm20949-201ENSMUST00000206478 952 ntBASIC20.1■□□□□ 0.81
Ccne1Q61457 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ccne1Q61457 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ccne1Q61457 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC20.1■□□□□ 0.81
Ccne1Q61457 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ccne1Q61457 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Ccne1Q61457 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ccne1Q61457 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Ccne1Q61457 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ccne1Q61457 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ccne1Q61457 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Ccne1Q61457 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC20.09■□□□□ 0.81
Ccne1Q61457 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ccne1Q61457 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ccne1Q61457 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC20.09■□□□□ 0.81
Ccne1Q61457 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ccne1Q61457 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ccne1Q61457 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ccne1Q61457 Gm18057-201ENSMUST00000208220 503 ntBASIC20.09■□□□□ 0.81
Ccne1Q61457 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ccne1Q61457 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Ccne1Q61457 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ccne1Q61457 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ccne1Q61457 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ccne1Q61457 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ccne1Q61457 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ccne1Q61457 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ccne1Q61457 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ccne1Q61457 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ccne1Q61457 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ccne1Q61457 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Ccne1Q61457 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ccne1Q61457 Gm43072-201ENSMUST00000200283 1671 ntBASIC20.08■□□□□ 0.81
Ccne1Q61457 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ccne1Q61457 Mir449b-201ENSMUST00000104833 80 ntBASIC20.08■□□□□ 0.81
Ccne1Q61457 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ccne1Q61457 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC20.08■□□□□ 0.81
Ccne1Q61457 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC20.08■□□□□ 0.81
Ccne1Q61457 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
Ccne1Q61457 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ccne1Q61457 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ccne1Q61457 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ccne1Q61457 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ccne1Q61457 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Ccne1Q61457 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccne1Q61457 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms