Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Mre11Q61216 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC18.65■□□□□ 0.58
Mre11Q61216 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Mre11Q61216 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Mre11Q61216 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mre11Q61216 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mre11Q61216 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mre11Q61216 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.58
Mre11Q61216 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Mre11Q61216 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Mre11Q61216 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
Mre11Q61216 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Mre11Q61216 Gm5049-201ENSMUST00000195878 1590 ntBASIC18.64■□□□□ 0.58
Mre11Q61216 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Mre11Q61216 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Mre11Q61216 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Mre11Q61216 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Mre11Q61216 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Mre11Q61216 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.64■□□□□ 0.57
Mre11Q61216 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Mre11Q61216 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Mre11Q61216 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Mre11Q61216 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Mre11Q61216 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Mre11Q61216 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Mre11Q61216 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC18.64■□□□□ 0.57
Mre11Q61216 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Mre11Q61216 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Mre11Q61216 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Mre11Q61216 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Mre11Q61216 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Mre11Q61216 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC18.64■□□□□ 0.57
Mre11Q61216 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Mre11Q61216 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Mre11Q61216 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Mre11Q61216 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Mre11Q61216 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Mre11Q61216 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Mre11Q61216 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mre11Q61216 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mre11Q61216 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Mre11Q61216 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Mre11Q61216 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mre11Q61216 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mre11Q61216 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Mre11Q61216 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mre11Q61216 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mre11Q61216 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mre11Q61216 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mre11Q61216 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Mre11Q61216 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Mre11Q61216 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
Mre11Q61216 Gm37856-201ENSMUST00000191634 999 ntBASIC18.63■□□□□ 0.57
Mre11Q61216 Gm29707-201ENSMUST00000196325 491 ntBASIC18.63■□□□□ 0.57
Mre11Q61216 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Mre11Q61216 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Mre11Q61216 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.63■□□□□ 0.57
Mre11Q61216 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mre11Q61216 Gm45605-201ENSMUST00000210265 4269 ntBASIC18.63■□□□□ 0.57
Mre11Q61216 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Mre11Q61216 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Mre11Q61216 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Mre11Q61216 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Mre11Q61216 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Mre11Q61216 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Mre11Q61216 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.62■□□□□ 0.57
Mre11Q61216 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Mre11Q61216 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.62■□□□□ 0.57
Mre11Q61216 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Mre11Q61216 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.62■□□□□ 0.57
Mre11Q61216 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Mre11Q61216 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Mre11Q61216 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Mre11Q61216 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Mre11Q61216 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Mre11Q61216 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Mre11Q61216 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Mre11Q61216 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Mre11Q61216 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Mre11Q61216 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC18.62■□□□□ 0.57
Mre11Q61216 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Mre11Q61216 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Mre11Q61216 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Mre11Q61216 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Mre11Q61216 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Mre11Q61216 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC18.61■□□□□ 0.57
Mre11Q61216 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC18.61■□□□□ 0.57
Mre11Q61216 Gm30437-201ENSMUST00000206086 1201 ntBASIC18.61■□□□□ 0.57
Mre11Q61216 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Mre11Q61216 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC18.61■□□□□ 0.57
Mre11Q61216 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Mre11Q61216 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Mre11Q61216 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Mre11Q61216 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Mre11Q61216 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Mre11Q61216 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Mre11Q61216 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Mre11Q61216 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Mre11Q61216 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Mre11Q61216 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms