Protein–RNA interactions for Protein: Q61060

Foxd3, Forkhead box protein D3, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd3Q61060 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Foxd3Q61060 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Foxd3Q61060 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Foxd3Q61060 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.27□□□□□ -0.12
Foxd3Q61060 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Foxd3Q61060 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Foxd3Q61060 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Foxd3Q61060 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Foxd3Q61060 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Foxd3Q61060 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Foxd3Q61060 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.27□□□□□ -0.12
Foxd3Q61060 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Foxd3Q61060 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Foxd3Q61060 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Foxd3Q61060 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Foxd3Q61060 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.27□□□□□ -0.13
Foxd3Q61060 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Foxd3Q61060 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.27□□□□□ -0.13
Foxd3Q61060 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Foxd3Q61060 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Foxd3Q61060 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Foxd3Q61060 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Foxd3Q61060 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Foxd3Q61060 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.27□□□□□ -0.13
Foxd3Q61060 Asic1-205ENSMUST00000228185 1818 ntBASIC14.27□□□□□ -0.13
Foxd3Q61060 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Foxd3Q61060 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Foxd3Q61060 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Foxd3Q61060 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.26□□□□□ -0.13
Foxd3Q61060 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Foxd3Q61060 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Foxd3Q61060 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Foxd3Q61060 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Foxd3Q61060 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Foxd3Q61060 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Foxd3Q61060 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Foxd3Q61060 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Foxd3Q61060 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Foxd3Q61060 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Foxd3Q61060 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Foxd3Q61060 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Foxd3Q61060 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Foxd3Q61060 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Foxd3Q61060 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Foxd3Q61060 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Foxd3Q61060 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Foxd3Q61060 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Foxd3Q61060 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC14.26□□□□□ -0.13
Foxd3Q61060 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC14.26□□□□□ -0.13
Foxd3Q61060 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.26□□□□□ -0.13
Foxd3Q61060 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Foxd3Q61060 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Foxd3Q61060 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Foxd3Q61060 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Foxd3Q61060 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Foxd3Q61060 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Foxd3Q61060 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Foxd3Q61060 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Foxd3Q61060 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Foxd3Q61060 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Foxd3Q61060 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Foxd3Q61060 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Foxd3Q61060 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Foxd3Q61060 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Foxd3Q61060 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Foxd3Q61060 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Foxd3Q61060 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Foxd3Q61060 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Foxd3Q61060 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Foxd3Q61060 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Foxd3Q61060 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.25□□□□□ -0.13
Foxd3Q61060 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Foxd3Q61060 Gm5864-201ENSMUST00000202263 970 ntBASIC14.25□□□□□ -0.13
Foxd3Q61060 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Foxd3Q61060 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Foxd3Q61060 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Foxd3Q61060 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Foxd3Q61060 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Foxd3Q61060 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.25□□□□□ -0.13
Foxd3Q61060 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Foxd3Q61060 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Foxd3Q61060 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.25□□□□□ -0.13
Foxd3Q61060 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Foxd3Q61060 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Foxd3Q61060 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Foxd3Q61060 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
Foxd3Q61060 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Foxd3Q61060 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Foxd3Q61060 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Foxd3Q61060 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Foxd3Q61060 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Foxd3Q61060 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Foxd3Q61060 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
Foxd3Q61060 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Foxd3Q61060 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Foxd3Q61060 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Foxd3Q61060 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.24□□□□□ -0.13
Foxd3Q61060 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Foxd3Q61060 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Foxd3Q61060 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms