Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.9□□□□□ -0.02
ClpbQ60649 Gm7506-201ENSMUST00000207758 815 ntBASIC14.9□□□□□ -0.02
ClpbQ60649 Gm6376-201ENSMUST00000209407 580 ntBASIC14.9□□□□□ -0.02
ClpbQ60649 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.9□□□□□ -0.02
ClpbQ60649 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.9□□□□□ -0.02
ClpbQ60649 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
ClpbQ60649 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ClpbQ60649 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
ClpbQ60649 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ClpbQ60649 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
ClpbQ60649 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ClpbQ60649 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
ClpbQ60649 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ClpbQ60649 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ClpbQ60649 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ClpbQ60649 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ClpbQ60649 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
ClpbQ60649 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ClpbQ60649 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ClpbQ60649 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
ClpbQ60649 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
ClpbQ60649 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
ClpbQ60649 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.89□□□□□ -0.03
ClpbQ60649 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
ClpbQ60649 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.89□□□□□ -0.03
ClpbQ60649 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
ClpbQ60649 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
ClpbQ60649 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ClpbQ60649 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.89□□□□□ -0.03
ClpbQ60649 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ClpbQ60649 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
ClpbQ60649 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ClpbQ60649 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
ClpbQ60649 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ClpbQ60649 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
ClpbQ60649 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ClpbQ60649 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
ClpbQ60649 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ClpbQ60649 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
ClpbQ60649 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ClpbQ60649 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ClpbQ60649 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ClpbQ60649 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ClpbQ60649 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
ClpbQ60649 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
ClpbQ60649 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ClpbQ60649 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
ClpbQ60649 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ClpbQ60649 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.88□□□□□ -0.03
ClpbQ60649 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ClpbQ60649 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ClpbQ60649 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
ClpbQ60649 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC14.88□□□□□ -0.03
ClpbQ60649 Gm44771-201ENSMUST00000206975 626 ntBASIC14.88□□□□□ -0.03
ClpbQ60649 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.88□□□□□ -0.03
ClpbQ60649 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ClpbQ60649 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.88□□□□□ -0.03
ClpbQ60649 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
ClpbQ60649 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ClpbQ60649 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ClpbQ60649 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ClpbQ60649 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
ClpbQ60649 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
ClpbQ60649 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ClpbQ60649 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
ClpbQ60649 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ClpbQ60649 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
ClpbQ60649 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ClpbQ60649 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ClpbQ60649 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
ClpbQ60649 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ClpbQ60649 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
ClpbQ60649 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ClpbQ60649 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
ClpbQ60649 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ClpbQ60649 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
ClpbQ60649 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
ClpbQ60649 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ClpbQ60649 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ClpbQ60649 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.87□□□□□ -0.03
ClpbQ60649 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ClpbQ60649 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
ClpbQ60649 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.87□□□□□ -0.03
ClpbQ60649 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ClpbQ60649 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
ClpbQ60649 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
ClpbQ60649 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ClpbQ60649 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
ClpbQ60649 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
ClpbQ60649 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC14.87□□□□□ -0.03
ClpbQ60649 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.87□□□□□ -0.03
ClpbQ60649 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC14.87□□□□□ -0.03
ClpbQ60649 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.87□□□□□ -0.03
ClpbQ60649 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.87□□□□□ -0.03
ClpbQ60649 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ClpbQ60649 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
ClpbQ60649 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ClpbQ60649 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ClpbQ60649 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
ClpbQ60649 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 109.4 ms