Protein–RNA interactions for Protein: Q5YIR8

Clec4a4, C-type lectin domain family 4, member a4, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clec4a4Q5YIR8 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.32■□□□□ 0.04
Clec4a4Q5YIR8 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Clec4a4Q5YIR8 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Clec4a4Q5YIR8 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Clec4a4Q5YIR8 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
Clec4a4Q5YIR8 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clec4a4Q5YIR8 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clec4a4Q5YIR8 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clec4a4Q5YIR8 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Clec4a4Q5YIR8 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clec4a4Q5YIR8 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clec4a4Q5YIR8 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Clec4a4Q5YIR8 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clec4a4Q5YIR8 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clec4a4Q5YIR8 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clec4a4Q5YIR8 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Clec4a4Q5YIR8 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC15.31■□□□□ 0.04
Clec4a4Q5YIR8 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Clec4a4Q5YIR8 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Clec4a4Q5YIR8 Gm18622-201ENSMUST00000219361 595 ntBASIC15.31■□□□□ 0.04
Clec4a4Q5YIR8 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clec4a4Q5YIR8 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clec4a4Q5YIR8 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clec4a4Q5YIR8 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clec4a4Q5YIR8 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Clec4a4Q5YIR8 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clec4a4Q5YIR8 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clec4a4Q5YIR8 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clec4a4Q5YIR8 Gm5648-201ENSMUST00000122244 1587 ntBASIC15.31■□□□□ 0.04
Clec4a4Q5YIR8 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Clec4a4Q5YIR8 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Clec4a4Q5YIR8 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Clec4a4Q5YIR8 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Clec4a4Q5YIR8 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clec4a4Q5YIR8 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Clec4a4Q5YIR8 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clec4a4Q5YIR8 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clec4a4Q5YIR8 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clec4a4Q5YIR8 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clec4a4Q5YIR8 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clec4a4Q5YIR8 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clec4a4Q5YIR8 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clec4a4Q5YIR8 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clec4a4Q5YIR8 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clec4a4Q5YIR8 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clec4a4Q5YIR8 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC15.3■□□□□ 0.04
Clec4a4Q5YIR8 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC15.3■□□□□ 0.04
Clec4a4Q5YIR8 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC15.3■□□□□ 0.04
Clec4a4Q5YIR8 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.3■□□□□ 0.04
Clec4a4Q5YIR8 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.3■□□□□ 0.04
Clec4a4Q5YIR8 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Clec4a4Q5YIR8 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Clec4a4Q5YIR8 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Clec4a4Q5YIR8 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clec4a4Q5YIR8 AC174742.1-201ENSMUST00000218272 304 ntBASIC15.3■□□□□ 0.04
Clec4a4Q5YIR8 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.3■□□□□ 0.04
Clec4a4Q5YIR8 Bloc1s5-203ENSMUST00000224902 612 ntBASIC15.3■□□□□ 0.04
Clec4a4Q5YIR8 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clec4a4Q5YIR8 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clec4a4Q5YIR8 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clec4a4Q5YIR8 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Clec4a4Q5YIR8 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clec4a4Q5YIR8 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clec4a4Q5YIR8 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clec4a4Q5YIR8 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clec4a4Q5YIR8 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clec4a4Q5YIR8 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clec4a4Q5YIR8 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Clec4a4Q5YIR8 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
Clec4a4Q5YIR8 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clec4a4Q5YIR8 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clec4a4Q5YIR8 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Clec4a4Q5YIR8 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Clec4a4Q5YIR8 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clec4a4Q5YIR8 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clec4a4Q5YIR8 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Clec4a4Q5YIR8 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Clec4a4Q5YIR8 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clec4a4Q5YIR8 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Clec4a4Q5YIR8 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC15.29■□□□□ 0.04
Clec4a4Q5YIR8 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC15.29■□□□□ 0.04
Clec4a4Q5YIR8 Gm26308-201ENSMUST00000157768 69 ntBASIC15.29■□□□□ 0.04
Clec4a4Q5YIR8 Mir3113-201ENSMUST00000175478 76 ntBASIC15.29■□□□□ 0.04
Clec4a4Q5YIR8 Gm27646-201ENSMUST00000183989 110 ntBASIC15.29■□□□□ 0.04
Clec4a4Q5YIR8 AC084391.1-201ENSMUST00000200651 141 ntBASIC15.29■□□□□ 0.04
Clec4a4Q5YIR8 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC15.29■□□□□ 0.04
Clec4a4Q5YIR8 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clec4a4Q5YIR8 AC159106.1-201ENSMUST00000224421 690 ntBASIC15.29■□□□□ 0.04
Clec4a4Q5YIR8 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clec4a4Q5YIR8 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clec4a4Q5YIR8 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clec4a4Q5YIR8 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clec4a4Q5YIR8 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Clec4a4Q5YIR8 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clec4a4Q5YIR8 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC15.29■□□□□ 0.04
Clec4a4Q5YIR8 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clec4a4Q5YIR8 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
Clec4a4Q5YIR8 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clec4a4Q5YIR8 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Clec4a4Q5YIR8 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms